| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_119612 |
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| Symbol | Caf1 |
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| ID | 5000303 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Ostreococcus lucimarinus CCE9901 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009356 |
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| Strand | + |
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| Start bp | 645618 |
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| End bp | 646500 |
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| Gene Length | 883 bp |
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| Protein Length | 276 aa |
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| Translation table | |
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| GC content | 43% |
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| IMG OID | 640415724 |
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| Product | polyA tail-shortening ribonuclease, probable |
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| Protein accession | XP_001416204 |
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| Protein GI | 145342468 |
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| COG category | [A] RNA processing and modification |
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| COG ID | [COG5228] mRNA deadenylase subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.242969 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTAGCG CGTTGACACC ATCTACTTTG CACACACGTG ATGTATGGGC GCATAATTTG
GATGAAGAGT GTGCACTGAT TCGTGAGGTT GTATGTAACT ACCCATATGT CGCGATGGAT
ACCGAGTTTC CTGGTGTTGT GCGTATTCTG TCTTCTTACC TTTTTCCATA ATTCTCACAG
TCGTCTCTAG GTCGCTCGCC CAGTTGGCTC TTTCAAACAC CAAGCCGAAT TTCAATACCA
AACTTTACGT TGCAATGTGG ACTTGCTCAA GTTGATTCAA CTTGGTTTGA CATTTTCAGA
CGGTGCTGGA AATTTACCAG TCGTCGATGG GCGGTTCTGT ATATGGCAAT TCAACTTCAA
AGAATTCAAC GTTAAAGATG AGCTCTACGC GCAAGATTCT ATCGAGCTAT TAAAGGAAAG
TGGTATCGAT TTCAATTTGC TGGAGGAACG TGGAATAGAC ATTGTTCAGT TTGGCGAGAA
ACTTATGGTT AGTGGTGTGG TTTTGAACGA TGATATCCGC TGGTTAACAT TTCATAGTAG
TTACGACTTT GGGTACTTAC TCAAGCTACT GACAAACGCT CCACTGCCTG ACAAAGAGGC
TGACTTTTTT ACACTTCTGC AGTGTTATTT CCCGTGTATT TATGACATCA AACACTTGAT
GCAGTTTGTT GGTAACATGC ACGGCGGACT GAATAAACTT GCCGAATATT TACATGTAGC
ACGTATAGGG CCTCAGCACC AGGCCGGTAG TGATAGTTTG CTCACCGCAC ATACGTTTTT
CAAGCTTCAG AAGTCTCACT TCTCAAATGT GAACATGCAT CAGTTCGCTG GATCGTTATA
TGGTTTAGGT CAGGAATCTC TCAGCCAGCC CATAGCTGAT TGA
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| Protein sequence | MSSALTPSTL HTRDVWAHNL DEECALIREV VCNYPYVAMD TEFPGVVARP VGSFKHQAEF
QYQTLRCNVD LLKLIQLGLT FSDGAGNLPV VDGRFCIWQF NFKEFNVKDE LYAQDSIELL
KESGIDFNLL EERGIDIVQF GEKLMVSGVV LNDDIRWLTF HSSYDFGYLL KLLTNAPLPD
KEADFFTLLQ CYFPCIYDIK HLMQFVGNMH GGLNKLAEYL HVARIGPQHQ AGSDSLLTAH
TFFKLQKSHF SNVNMHQFAG SLYGLGQESL SQPIAD
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