| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_119596 |
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| Symbol | GatA |
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| ID | 5000211 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Ostreococcus lucimarinus CCE9901 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009356 |
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| Strand | + |
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| Start bp | 621557 |
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| End bp | 623334 |
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| Gene Length | 1778 bp |
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| Protein Length | 554 aa |
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| Translation table | |
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| GC content | 47% |
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| IMG OID | 640415632 |
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| Product | Glutamyl-tRNA(Gln) amidotransferase subunit A, probable |
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| Protein accession | XP_001416197 |
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| Protein GI | 145342453 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | [TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0939651 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGATTGA ATCCGTGCAG TTGCCAAGGA AGGCCGACTG GTGTATCACA TACTGGACGC
TCAAGTGTAC CACCTTCTGT GCGTCCACGA AATACGTCGT TCAATAGTTC ATCACTCTTG
AATTCAAGAC AGTTAGCACG TGGTGAAGTG CGCTGCGCCT CATTGATACA CAATCTCAGT
CACGCTTTAA AGAGCGGAAA AATATCTGCA GTCGAGCTCA CCAGCGCCTA CCTTGATAGG
GTGAGTAGCA ATGTCATGAC TCACCCACAC ACGGCTTGAA CTGACTCTTT GGGGATAGAT
ACGCTCAATA GATAACACTA TTGGGAGTTT CGTACAGGTG GATTTTGCTG GTGCTATCGA
ACAGGTGAGA GTGTGCTCTG ATACCATGTC CTTTGTTCAG AACTCAGTTT CTCGCACAGG
CGAAACAAAT TGATTCACGT ATTGCGACCG GCCAAGATCT TCACATTCTT GCCGGTATTC
CTCTCGCAAT AAAAGACAAT ATTTGTCATC AGGATCTTTC CACGACAGCG GGCTCCAATC
TCTTGAGAGC TCATCAGTCT TCGTATGATG CTGAAGTTGT CACAGTCCTG AAGGGTTGTG
GCTCAGTGTT GATCGGAAAG ACGAATATGG ATGAGTTTGG TATGGGAAGT ACGACTGAAA
CATCGGCCAA CAAAGCAACT CATAACCCTT GGGATCTATC TCGAGTGCCT GGTGGTTCAT
CTGGGGGCTC TGCAGCGGCA GTGGCGGGGC AAATGTGTGC TGGTGCTTTG GGAAGTGACA
CTGGGGGTTC TATACGACAA CCGGCAGCAT TCTGCGGTGT TGTTGGCTTA AAGCCCACTT
ATGGCGCGAT ATCGAGGCAT GGCCTCATAG CTTATTGCTC CACTTTTGAC ACCATTGGAC
CAATCGGCCC GACAGTGCAG GATGTGTCTT ATATATTTGG TGCTCTTCAG AAGGACGGAA
ACATAAAGAA GATGCGTGAC ACAAGTTTAC GGCATTCAAG CATTATCGAG ACATCACTCC
CACCGCAAGC TTCTCTTAGT TGCAGACCAT ACGAAGGTAG ACGCTTTGCT GTAATAGCAG
AGGCGATAGA TGAAGGAGTC GCAGATGAAG TGAAATTTTC ATTTTTTGAC TCAGTTCGGC
ATATAGAAAG TCTTGGAGGG GTGGTGGACC TCGTCTCGTG CAAAACGTTC CAAATGGGTC
TACCTGCGTA TTATGTCATG GCCGTTTCAG AGGCTAGCAG TAATTTAGCT CGTTTTGATG
GCGTTCGTGT GGGCAACCGT GAGGCATCAT ATGAGAGTGT TACTGACTCA CTCGTCGGAC
ATTTTAGACA CAGTTATCTT GGTCCAGAAG TTCTTCGACG TATTCTCATG GGTACATATA
CACTATCTTC TGGTTACAGT GATGAATATT ACGCTAGAGC AAAGTATGCT CAACGTCTTG
TCCGTGATGA ACTTATAAGC TACCTCAGCC AGTACGACGC TTTGCTGACC CCAGCTACGC
CTGATGTTGC TTATACACGT GGGAGCAAAA TCATGGATCC TTTGCAGATG TATACGGGAG
ATTTAATGAC AGTCAACGTC AATCTTTCTG GCTTACCGGC TATCGTAGTG CGATCTGGAG
TCCTCACTGT AGCAGAGGGT ACACACCTCC CTATTGGTTT GCAGTTCATC GGTAAACATT
TCGGTGAAGG TGAACTATTG CAGATAGCTC ACATTTTCGA GATTTCACTA GATAGCGTCA
CCAAGTTTCC GGACGAAGAA ATTTTCTCGT GGCTTTGA
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| Protein sequence | MRLNPCSCQG RPTGVSHTGR SSVPPSVRPR NTSFNSSSLL NSRQLARGEV RCASLIHNLS
HALKSGKISA VELTSAYLDR IRSIDNTIGS FVQVDFAGAI EQAKQIDSRI ATGQDLHILA
GIPLAIKDNI CHQDLSTTAG SNLLRAHQSS YDAEVVTVLK GCGSVLIGKT NMDEFGMGST
TETSANKATH NPWDLSRVPG GSSGGSAAAV AGQMCAGALG SDTGGSIRQP AAFCGVVGLK
PTYGAISRHG LIAYCSTFDT IGPIGPTVQD VSYIFGALQK DGNIKKMRDT SLRHSSIIET
SLPPQASLSC RPYEGRRFAV IAEAIDEGVA DEVKFSFFDS VRHIESLGGV VDLVSCKTFQ
MGLPAYYVMA VSEASSNLAR FDGVRVGNRE ASYESVTDSL VGHFRHSYLG PEVLRRILMG
TYTLSSGYSD EYYARAKYAQ RLVRDELISY LSQYDALLTP ATPDVAYTRG SKIMDPLQMY
TGDLMTVNVN LSGLPAIVVR SGVLTVAEGT HLPIGLQFIG KHFGEGELLQ IAHIFEISLD
SVTKFPDEEI FSWL
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