| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_119580 |
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| Symbol | srrA |
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| ID | 5000172 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ostreococcus lucimarinus CCE9901 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009356 |
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| Strand | + |
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| Start bp | 601639 |
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| End bp | 603216 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | |
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| GC content | 46% |
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| IMG OID | 640415593 |
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| Product | predicted protein |
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| Protein accession | XP_001416189 |
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| Protein GI | 145342437 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0552] Signal recognition particle GTPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00236859 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCACTC TAAAACAAGT ATCGGTCTTT TCACGCGGTG GGCTTGTTCT CGTGCACGAG
TGTTTCACGA AAGAGGTCGT TCTTCTGACC GAACTTTCAG AATGCGCGCA TACCTTGAAA
AGCGATTCAG ATCGATCTAT TGAGTCAAGA ATTGCAGCCT ACGATTCTCA GAAGAGCAAA
GTTATTTGGC TAAGTGACGC TGTCACTGGT TTGACGTTTA TACTCTCCTT CGAAGAGGCT
TTAGAGAAAC ACGAGGCAGA CGATTTACTC AGGACAAGCA AAGACGCATT TGCTGAATAC
TACGAACATG ATCGATTCGA CTACAGTGAA TTCCTACCCG CTCTCCAAGC ACGGATTCAG
CAATTGGAAA GGTCTAATGA GCACTGCGAG CTTGGTGCTG CTAGTGAACG GTCAGGCGTG
GATAACTCTG TTTCCGACAG TAAACTGCCT TCACGCGATT TTGGACGTAC AAAGAGGCAG
CATCACTACC ATGACCCATC CGTGCCCAGA TCTCGCCATT CAGAAAGGCT CGATTCACTC
GATTTCTCAG AGCCGTCACA GGTTGCTCAG CCGCCGATTT TTCCAGAGCC TTCAAGCACT
CAATCAAAAC ATACTCAAGC TATTAAGCAC GAGGGGGGGA AACGTCTGGG CTTGAGCTGG
TGCCGTGATC TTGTTAGTTT CCGTGAAACA CACATTAGTG AGGAATCTTT GTTACCTCTC
ACAGCGTCAA TCAAACACAA ATTGACTCAA AAAAATGTGA CGAGCGATAT AGCTGATTTA
CTGGTGACAG AAGTTGCACA GAAACTCGTA GGGAAAAAAG TTTCTACATT CCAGTCACTA
GCAAGCATAG TCTACCGTTC ACTTGAGGAG TCAATCATTC GTATACTGAG TTCTGCGAAG
AAAATTGACC TATTGACTGA GGTCGGAAGC GCTCGTAAGA GTAGAAGACC TTTCGTGATT
GCGTTTGTTG GCGTGAACGG TGTCGGTAAA AGTACGAGTC TATCGAAGGT AGTACATTGG
CTTAGTCAGC AAAATTTCTC AGTGATGGTT GCTGCATGTG ACACGTTTCG TGCTGGTGCA
GTAGAGCAAC TACGGACACA CTGTCAACGT CTTGACTGTG CGCTTTTTGA GAGAGGCTAC
GAAAGAGATC CATCAGTTAT CGCTCAACAA GCTATTCAGC AAGCCACGCG ACAAGGTATT
GATGTCGTCA TGATAGATAC TGCAGGGCGC ATGCAAGACA ACGAACCATT AATGCGAGCA
CTTGCAAAAC TCTTGAGTGT AAACCTGCCT GATTTGACAC TGTTTGTAGG CGAAGCACTG
GTCGGAAATG ATGGCGTGAG CCAAATTTTG CAGTTTGAGC ATAGATTACA AGCATTGATG
CAAACGGAGA AGAAATGTGT CATAGATGGC ATCTTCCTTT CAAAATTCGA CACCATCGAC
AATAAAGTTG GCACTGCTTT ATCGTTAGTG TATGCGTCTT CGATTCCCAT CATGTTTGTT
GGTACTGGGC AGATGTATAA GGATGTTCGT ACTTTTCAGG CTGAAAATAT TGCAACCGTA
CTTCTTGCTG ATTCATGA
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| Protein sequence | MPTLKQVSVF SRGGLVLVHE CFTKEVVLLT ELSECAHTLK SDSDRSIESR IAAYDSQKSK
VIWLSDAVTG LTFILSFEEA LEKHEADDLL RTSKDAFAEY YEHDRFDYSE FLPALQARIQ
QLERSNEHCE LGAASERSGV DNSVSDSKLP SRDFGRTKRQ HHYHDPSVPR SRHSERLDSL
DFSEPSQVAQ PPIFPEPSST QSKHTQAIKH EGGKRLGLSW CRDLVSFRET HISEESLLPL
TASIKHKLTQ KNVTSDIADL LVTEVAQKLV GKKVSTFQSL ASIVYRSLEE SIIRILSSAK
KIDLLTEVGS ARKSRRPFVI AFVGVNGVGK STSLSKVVHW LSQQNFSVMV AACDTFRAGA
VEQLRTHCQR LDCALFERGY ERDPSVIAQQ AIQQATRQGI DVVMIDTAGR MQDNEPLMRA
LAKLLSVNLP DLTLFVGEAL VGNDGVSQIL QFEHRLQALM QTEKKCVIDG IFLSKFDTID
NKVGTALSLV YASSIPIMFV GTGQMYKDVR TFQAENIATV LLADS
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