| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_119554 |
|---|
| Symbol | Mak16 |
|---|
| ID | 5000120 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009356 |
|---|
| Strand | - |
|---|
| Start bp | 542749 |
|---|
| End bp | 543850 |
|---|
| Gene Length | 1102 bp |
|---|
| Protein Length | 226 aa |
|---|
| Translation table | |
|---|
| GC content | 44% |
|---|
| IMG OID | 640415541 |
|---|
| Product | MAK16-like nucleolar RNA binding protein, putative |
|---|
| Protein accession | XP_001416423 |
|---|
| Protein GI | 145343639 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5129] Nuclear protein with HMG-like acidic region |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.113172 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAGTG ACGAAGTAGT TTGGCAGGTG CGCCCGCACG ATACTTTTGA TCCTACTCTT
CCCGTCATCC ATACTATAAC ACAGATCATT AACCATGGAC AATGTAGCTA TAGGGCTACA
TCAGAGACGT CCAATTTTTG TCGGAATGAA TTTAGCTTGA CTGGAATGTG CAACCGAAGT
TCTTGTCCAC TTTCAAACAG TCAGTACGCG ACGATTCGAG AAGAGTGTGG TGAGCTACTC
TTAGCGAACT GTGAAGTTCT GAAATTCACT TACTCAACTA GGCATCCTCA ACCTATACAC
AAAGACTGTA GAGCGTTCAC ATATGCCTTC AAAGTTGTGG GAGAAGACGG AACTCAGTCC
CAAATATGCG GAAGCTCTGG AACAGATAAA CTCTTCTCTG AGACATTGGT GAGTAAATTC
CGAAACGTTT GAACAGGATC GTGATAAGCG GATTAGGCCA AAGTTTCTAG TTCACAAGAG
CAAGCAACGT CTGACAAAGT TGACTCAGCT ACTCATACGT TCAAGGAAAT TAGAAAAAGT
TGGGAGGTGA GTCAGGTGCA ACTGGTTCGT GACGAGTTCA TTTACTCTGA CTTTAGGGAA
AAAATCCAAA CAATGCCAGC ACGACATACA CAGCGCGATG CGAGAGCGGA AAGTAAGGTA
AAGTCTCTCG CGCACACAAT TTGCATACGA ATATTAACTT TCGTGAAAAC AAGGCTCAAG
TGGCGGCGCG TTTGGACTCG AGTATTGAAA ATGAGTTGCT GGTATGCCTT ACTCCAGGTT
ATGACGGCGC GAATTTGAGA AACGATATGT AGGAACGATT GAACGCTGGC GTCTACGAAT
CTAGCTACCA ATTTTCTACG GCTAGATACT CACATGCTTT AGAGGTAGGC CAGACTCGCA
AAAATATTGG ATTGTATCTA ACGCTTCTCT CTGCGACAGG GAACAAGGAA AATGGGAAGT
CCAGAAACCA AAACTCCGCG GAAAATCCGC CAGCGCCGTC TACAACGGGA GATTGAATAT
GAACAGATCA GGTAAGTGAT TACTGGTATT TTCCATGGAG ATATATATTT TACTTTTGTC
CAGAACCTCA GTAGAACAGT GA
|
|---|
| Protein sequence | MQSDEVVWQI INHGQCSYRA TSETSNFCRN EFSLTGMCNR SSCPLSNSQY ATIREECGIL
NLYTKTVERS HMPSKLWEKT ELSPKYAEAL EQINSSLRHW PKFLVHKSKQ RLTKLTQLLI
RSRKLEKVGR EKIQTMPARH TQRDARAESK AQVAARLDSS IENELLERLN AGVYESSYQF
STARYSHALE GTRKMGSPET KTPRKIRQRR LQREIEYEQI RTSVEQ
|
|---|
| |