| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_119543 |
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| Symbol | SgpL |
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| ID | 5000176 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Ostreococcus lucimarinus CCE9901 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009356 |
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| Strand | - |
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| Start bp | 517903 |
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| End bp | 519599 |
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| Gene Length | 1697 bp |
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| Protein Length | 532 aa |
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| Translation table | |
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| GC content | 45% |
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| IMG OID | 640415597 |
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| Product | Sphingosine-1-phosphate lyase |
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| Protein accession | XP_001416416 |
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| Protein GI | 145343624 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCATCTA ATGTTACGTC ACAGTCAACG TGTGCGGGTA CTTTTTTCAA ACTTTGTTTC
CGCTCCTTGA ACGTGGAGTC AGTCCAATAT TGTTGGTTTG TGGACTCCTG ATCTATATTC
TCGCTACGGG CGTGTGCAAG ATCCTCGACG GATTACTTAG AACTCAAAGA CAAGATGTGG
AGAAGCTCTT TCGATTGGCG CGAAGTCTAC CGGGTGTGCG GAATCTCGTG GCGCGTTCTA
AAGAGAAAAT ACTATCAGAA GTTGAAAGTG GTTTGAAGTC AGGAGTTTTG CCGGTACACA
GGACTCAAGA CTTGCCATGC GAGGGTCAAT CTATTCATGA GATTCTAAAA CAAGCAGATA
AACTCAAAGG ACACGACTGT AAGCACTTGT TTCACACCTC AAAAATGACC GGCACAGTAT
ACGCAACGGA GCTCACCCAT CGCGAGCTCT GCAATTCGAT GTACTGTAAT TTCGCCCATA
CGAATCCACT TCATGGTGAT GCGTTCCCTA GCGTCGCACG AATGGAGTCT GAAGTTGTCA
GTATGACCAG CATGTTGGTG TCGAATGATA GCAATTCAGA AATTTGTGGT GCTGTGACAT
CAGGTGGCAC AGAAAGCATT CTTACGGCAA TCAGGGCTTC TCGTGATTTT ATGTGCTACA
GCAAGCATAT CTCTCGACCA GAAATGTACG TTTGAGTTAT AAAATAAATA GTGCTGATCA
TGACAAACAG TTTTTATAGG ATCGTGTCAG TTTCTGCGCA CGCTGCAGTG TACAAGGCAG
CTGAATATTT CAAAATAAAC ATCGTGCGCG TTCCCACAGA TGAACATGGT CAAATGAACG
TGGCTGCTGT AAAACGTGCA CTCAGTCGTC GGACAATTTT GATATACGCA TCAGCCCCAA
CTTACCCTCA TGGGGTGATA GATCCGATCG AGGAGCTCTC TGATATAGCA CTAGGTCAAA
GGTGTTGCTT ACACGTTGAT GCTTGTTTGG GGGGCTTTAT CCTACCGTTC TTGAGTGGGC
GCGAGATTGA GAGTCACGTC CCAAAATTTG ATTTTTCACT TGCAGGTGTT ACATCTATGA
GTTTAGACAC GCATAAGTAC GGCTACGCAC AAAAAGGTTC ATCGGTGGTG CTGTATTCAA
CATCTGTATT GCGTCAGTTT CAGTATACTT CAGTTGCTGA CTGGACAGGA GGTCTCTACA
TTTCTCCAAC CCCTGCTGGT TCACGGTCTG GAGGTTTAAT TGCACAGACG TGGGCTGCCA
TGTTACATAT GGGGCGCGAA GGATATTCAA GAGTAGCACA CGAAATAATT GAGAGTGCGA
TTAAGCTCCG TAAAGCGGTG GCAGATACGG ACGGTTTGGA GCTGATTGGG CGACACGCAA
CCATGGTAGT TGCGTGGCGT ACAACTGATC GAACAAACAA CGTTTATGTG CTCAATGATA
TATTATCTTC AAAAGGTTGG AGACTTGCTG TTTTACAGAA TCCAAGCGCA CTTCACTTTT
GTATAACTCC AGCGAATATT TCGTCTGTTG ATGCTTTGAT TGATGATCTG AAACAAGCTG
TTCAAACATC ACGGACCCTT GATAAGATTC CCGGAGGCAA GGCGCCTATA TATGGACTTG
CTCACGGCTT GCCGGATAGA GGAGTAGTGA AAGAGCTCCT TCGAGATATA CAAGATTTAA
TGCTACAAAA TGTATGA
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| Protein sequence | MPSNVTSQST PILLVCGLLI YILATGVCKI LDGLLRTQRQ DVEKLFRLAR SLPGVRNLVA
RSKEKILSEV ESGLKSGVLP VHRTQDLPCE GQSIHEILKQ ADKLKGHDCK HLFHTSKMTG
TVYATELTHR ELCNSMYCNF AHTNPLHGDA FPSVARMESE VVSMTSMLVS NDSNSEICGA
VTSGGTESIL TAIRASRDFM CYSKHISRPE IFYRIVSVSA HAAVYKAAEY FKINIVRVPT
DEHGQMNVAA VKRALSRRTI LIYASAPTYP HGVIDPIEEL SDIALGQRCC LHVDACLGGF
ILPFLSGREI ESHVPKFDFS LAGVTSMSLD THKYGYAQKG SSVVLYSTSV LRQFQYTSVA
DWTGGLYISP TPAGSRSGGL IAQTWAAMLH MGREGYSRVA HEIIESAIKL RKAVADTDGL
ELIGRHATMV VAWRTTDRTN NVYVLNDILS SKGWRLAVLQ NPSALHFCIT PANISSVDAL
IDDLKQAVQT SRTLDKIPGG KAPIYGLAHG LPDRGVVKEL LRDIQDLMLQ NV
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