Gene OSTLU_119538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_119538 
SymbolYvdD 
ID5000297 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009356 
Strand
Start bp509285 
End bp509869 
Gene Length585 bp 
Protein Length194 aa 
Translation table 
GC content49% 
IMG OID640415718 
Productlysine decarboxylase-related protein 
Protein accessionXP_001416413 
Protein GI145343617 
COG category[R] General function prediction only 
COG ID[COG1611] Predicted Rossmann fold nucleotide-binding protein 
TIGRFAM ID[TIGR00725] conserved hypothetical protein, DprA/Smf-related, family 1
[TIGR00730] conserved hypothetical protein, DprA/Smf-related, family 2 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0148223 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGAAC GGCGTCCTAT CGAGTGCGTG TGCGTGTATT GTGGATCGTC GGTGGGTTCG 
AACTCGTCGT ATTCGGTCGC TGCGCGGCTT TTAGGAGGGG AGCTAGTCAA GAGGGGCATC
TCCCTCGTGT ATGGCGGAGG TTCTGTCGGT CTCATGGGTA GTCTCGCAGA AGCTGTTAAT
TCTGATGGAG GCTCGGTGCT AGGGATAATT CCTTATTCAC TCGAACCAGA AGAAATAAGC
GGTAAGACCC CAGGTCAAGT TGTGGTGACA TCAGGCATGC ACGAACGAAA AACACAAATG
GCTGCGCGAG CTGACGCATT CATCGCTCTC CCTGGTGGCC TAGGCACTCT CGAGGAATTA
TTCGAAATAG CAACCTGGCG TCAGTTAGGA CATCATGAAA AACCGATTGG AATACTCAAT
GTGAACGGTT TCTTCAATCC ACTCTTGAAG TTCTTGGACA ACACTGTGGC TGAGGGTTTT
GTCTCAGCAA AAACCAGGGC AAACTTCATC GTTGATGATG ACGCTTCAGA GTTGATCGAG
AAGCTTTGTG TTGCTTATTT AAACATGCAA CCGAATGAAC TTTAA
 
Protein sequence
MTERRPIECV CVYCGSSVGS NSSYSVAARL LGGELVKRGI SLVYGGGSVG LMGSLAEAVN 
SDGGSVLGII PYSLEPEEIS GKTPGQVVVT SGMHERKTQM AARADAFIAL PGGLGTLEEL
FEIATWRQLG HHEKPIGILN VNGFFNPLLK FLDNTVAEGF VSAKTRANFI VDDDASELIE
KLCVAYLNMQ PNEL