Gene OSTLU_119535 details

Gene Information

• Locus tag: OSTLU_119535
• Symbol: Rrp4
• ID: 5000079
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ostreococcus lucimarinus CCE9901
• Kingdom: Eukaryota
• Replicon accession: NC_009356
• Strand: +
• Start bp: 505584
• End bp: 506168
• Gene Length: 585 bp
• Protein Length: 194 aa
• GC content: 47%
• IMG OID: 640415500
• Product: RNA-binding protein, possibly exosome complex Ribosomal RNA processing protein
• Protein accession: XP_001416166
• Protein GI: 145342242

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.0212619
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTGGGAA CAAAAAAACC GCTCTTACTC GCACCCGGTG ATCACTTTGA GTCCGATTCA 
ATTCTGAACA CCGCTGATAT ACCACATGTA ACAATTAGTA GAACGTCGAA GCTAGTCCTG 
GGCCAGCGGC AAAATTTCAA GGTCAGAACC AGCAGTAGTC CAACACCAGG AGCGAACGTC 
ATTGGCATCG TCACTAAAGT CTCACAGCAA AGTATTCACG CCATGATCAA TTCTTCGCTC 
GATGCTGAGA TTCCAATTAC CTGTCTTACT CACAGTCAGC GAAACGTGCG GGTAGGGTCT 
GCTATCCAAG CTACTGTTCA GTCGGTGTCG TCAAAGAAAG TTCTTTTGAC TTTTGATGTA 
AACGAAAAAG GAGTCGCAAA CGGCGTGCTT CACAAAGGTC GTGTATTTAG CTTCAGGCAG 
CAAGTATCTA TGGGCTGCCG TTGTAAACGC TGGAAGATGC AGGCGAGAAT GAAGGCGACT 
TGTCCCACAG ACATTGTACT AAGTCTGAAC CAGCAAATGT GGTTACGAAC GACGCAGCGC 
CGAAAAACAC GCGACGTTCA CACTCTATTA CTGGAATGCA TGTGA 

 

Protein sequence

MLGTKKPLLL APGDHFESDS ILNTADIPHV TISRTSKLVL GQRQNFKVRT SSSPTPGANV 
IGIVTKVSQQ SIHAMINSSL DAEIPITCLT HSQRNVRVGS AIQATVQSVS SKKVLLTFDV 
NEKGVANGVL HKGRVFSFRQ QVSMGCRCKR WKMQARMKAT CPTDIVLSLN QQMWLRTTQR 
RKTRDVHTLL LECM