Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_119532 |
Symbol | CopG |
ID | 5000385 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009356 |
Strand | + |
Start bp | 498396 |
End bp | 501002 |
Gene Length | 2607 bp |
Protein Length | 868 aa |
Translation table | |
GC content | 44% |
IMG OID | 640415806 |
Product | Coatomer gamma subunit |
Protein accession | XP_001416165 |
Protein GI | 145342240 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG5240] Vesicle coat complex COPI, gamma subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTTCTC CGATCGCAGA TTTTAACAGG AAGAGAGATG AGGATTCAGT CGAAGAGCTT TCTCCATTTT GGGGAATAGA AAAAGGCATA GTACTGCAAG AAGCTCGTTG TTTCAACGAT CCACAGTTGG ATGCACGTAA ATGCCAACAG GTGATCACAA AGCTTCTATA CCTGCATGTT CAAGGGGAGT TTTTCACAAA AACAGAGATA ACAGAGATCT TCTTTTCAGT AACAAAGTTG TTTCAGTCGA AAAATAACAA TCTCAGAAGG ATGCTCTATC TCATCATAAA GGAGATTTGT CCAACCTCTG ACGAAGTTAT TATCGTTACT TCATCGTTGA TGAAAGATAT GAACAGTAAA GTTGATCTAT ACCGAGCCAA CGCGATTCGT GTTCTTTGTT GCATAGCGGA CTCAGCAATA CTAGGCCAGA TCGAGCGTTA CCTGAAACAA GCGATAGTTG ACCGGAGTGA TGCCGTGTCT TCTGCTGCCT TGATATCAGC AACGCATTTG TCACTTGCAG ATGTTGATAT CGTGCGCCGA TGGAGCAGCG AAATCCAAGA GGCAGTCAAT TCGTCTTCTC CTGAGGTACA GTTTCATGCC TTGGGGCTTC TGTACGAGAT TCGTAAATTC GATAGACTCT CAATCAACAA GCTAGTCGCG CAATTGACCC GAACACAACT TAGATCCCCG TTAGCACAGT GTTTGCTTAT CAGGTATGTT TCAGAAGTGA TTAAAGACAG TGCGGAAGAT ACTGTGGCTC CACTGCACAC GTTTCTACAG AGCTGCATGA GGCATAAATC AGAAATTGTC GTCTTTGAAA GCATACGTGC AATCACGTCT CAACATGACT TGGAAGCGCA CCAATTGGTG TCGGTTGTGA ACGTTCTCCA GCTCCTGCTA TCGTCACCGA AACCAAGTTC ACGCTTTGCC GCGATGAGAG TTATCAATAA ATTGGCTTTT CTATTCCCAG ATCTGATATC AAACTGCAAC GCTGATATCG AAAATCTCAT ATCTGACGAG AACAAGTCAA TAGCTACTCT GGCCATAACC ACATTGTTGA AGACAGGCGG CGATGCTGCG GTTGAACGTC TGTTAGCTCG CATTCATTCG TTTATGTCAG AGATTCAAGA CGAGTTCAAG ATAATGATAA TAGAGGCAGT GCGAATAACG TGTATACGAT GTGCCCATAA GTATCGCATT TTGCTATCAT TCTTGTCCAC GTATTTGCGC GAAGAAGGAG GGTTCGAGTA CAAACAATCA ATCGTGCGAT CTATTGTGCA ACTATTTAAC GCAATACCAG AGGCAAAGGA ACTTTCACTT TCTTATCTAT CAGAGTTCAT TGAAGACTGT GAATACACGC AGCTTTCATG CGAAGTGCTG TATTTACTCG GAAAAGAGAC ACCATACACG ACTGATCCTG GAAAGTATCT GAGATACATC TACAATAGGG TGATTCTTGA GAATCCTTCC ATTCGAGCGG CCTCTATTTC GGCAATGGCG AGCATCGCTG TGCATTGCGA GATGTTAAAG GGACGTGTCT TAGTACTTTT GCGCCGCTGT CTTTTCGATA GTGATGATGA AGTTCGAGAT CGAGCGTGCG CATCAATTGC ACTCCTTGAG AAGGCATCTG CTCAGAAAGC TGGATCCCTT ACAACACACA CAACTGAAGC TTTCGAAAAT GTGTTACTCA AATACTGCCA GTCAAACTCA GATGAACCTA TTGATCTGCA GACTATCGTC ACTTCAAGTT CGGCAAACAG TGAGTCTACT AATAGCGCTT CGGTTCTCGA ACAAGAACAC GTGATTTCTG ACATCTCATA CTCAAATATA GCTTCAGTGC CATATTTTGC AACGTGTGGC GACGTTTTCA AGAGCTCTAT GAAAATTGAT CTGACAGAAG ACGAAACTGA ATACAAAATA TCGTGTGTCA AGCACATCTT TGATAGTCAT ATCGTCTTCG AATTCATTTG CAGCAACACT ATCAAAGAGC AAGCATTGAC AAATGTGACT GTCGCTATGG AGGCGTTGGG TACAAGTGGG CTCTTAGAGC CGACTGTGCT GCCTCTTAAT GTTATGCCAC TTACGTCGTA TGGGTCAACA TTTGTTGTGT TCGATCATGA AGTCGGCACA CAGGTAGAAG AAAGATTCGC TTGTACGTTG AAGTTTGTTT CGAAAGAGAT TGACCCTATC ACTGGGGCAC TCGAAGATGA TGGTTACGAA GATGAGTACT CAATAGAAGA TGTTGAGCTT CTTGCTACTG ACTTCATGCG TAGTGCTCGG GTTCAAGAAT TCAGTCAAGT CTGGAGCGAA AGTGAATCTT ACGTCGAGAA CACTTTTTCA AATATCGTCC TGCCTCATGA TACGGTTGAA AAATCTGTGA GTCATTTTTC TTCACTGCTT GGCTTCAGTC CGTGCATTGG GAAAACTGTC ACGCGTAATG CAACTTTGCA CACCGCGTGT TTTGCCGCAG AATTGTCAAC TGGGGAGCAT GTACTCATTA AAATTGCACT AAGTATGGAA TCGCAGTCGA GCGTGACCGC AACCGTCACC TGCCGAGCTC CTCAAGCGCA GCTTTGTAAC CAAGTACTTA GCGTAATCAC TTGTTAG
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Protein sequence | MTSPIADFNR KRDEDSVEEL SPFWGIEKGI VLQEARCFND PQLDARKCQQ VITKLLYLHV QGEFFTKTEI TEIFFSVTKL FQSKNNNLRR MLYLIIKEIC PTSDEVIIVT SSLMKDMNSK VDLYRANAIR VLCCIADSAI LGQIERYLKQ AIVDRSDAVS SAALISATHL SLADVDIVRR WSSEIQEAVN SSSPEVQFHA LGLLYEIRKF DRLSINKLVA QLTRTQLRSP LAQCLLIRYV SEVIKDSAED TVAPLHTFLQ SCMRHKSEIV VFESIRAITS QHDLEAHQLV SVVNVLQLLL SSPKPSSRFA AMRVINKLAF LFPDLISNCN ADIENLISDE NKSIATLAIT TLLKTGGDAA VERLLARIHS FMSEIQDEFK IMIIEAVRIT CIRCAHKYRI LLSFLSTYLR EEGGFEYKQS IVRSIVQLFN AIPEAKELSL SYLSEFIEDC EYTQLSCEVL YLLGKETPYT TDPGKYLRYI YNRVILENPS IRAASISAMA SIAVHCEMLK GRVLVLLRRC LFDSDDEVRD RACASIALLE KASAQKAGSL TTHTTEAFEN VLLKYCQSNS DEPIDLQTIV TSSSANSEST NSASVLEQEH VISDISYSNI ASVPYFATCG DVFKSSMKID LTEDETEYKI SCVKHIFDSH IVFEFICSNT IKEQALTNVT VAMEALGTSG LLEPTVLPLN VMPLTSYGST FVVFDHEVGT QVEERFACTL KFVSKEIDPI TGALEDDGYE DEYSIEDVEL LATDFMRSAR VQEFSQVWSE SESYVENTFS NIVLPHDTVE KSVSHFSSLL GFSPCIGKTV TRNATLHTAC FAAELSTGEH VLIKIALSME SQSSVTATVT CRAPQAQLCN QVLSVITC
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