Gene OSTLU_119510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_119510 
SymbolFip1 
ID5000525 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009356 
Strand
Start bp462865 
End bp463958 
Gene Length1094 bp 
Protein Length327 aa 
Translation table 
GC content47% 
IMG OID640415946 
ProductFip1 motif containing protein 
Protein accessionXP_001416398 
Protein GI145343583 
COG category[A] RNA processing and modification 
COG ID[COG5213] Polyadenylation factor I complex, subunit FIP1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.28813 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGGTT TTTCACGTGA GAAGGGCTTG AATGAGGAGA AACTGTTCGG AGAGGTAAAC 
CATTCAATTA TCAGCTTTTT TTGATTTCAT GACGATTGTG CAAAGATTTT CCATTCTGGC
GAGACTGGCT CCGGGGCTGA GCGGACAAGA AGCACTCCAG GTAAAATATT CGACTCAGGC
TGTTCGACGA CAACTAACGT CGACGTCACG TATCTATAGA ATCGCTAGAG GAACGCCGAG
GCACTGAATT TGTCAAGCAC GACGACAGAA AGATTCCGCA GCCTCCCCCA GGGAAACCGC
GAACAGGTCG TGAAAGCGTT TCAAGTAGGT TACCAGATGG TCGGTGGAAT ACGTATAACG
GACAAATGCC AAACGCTCGA TATAACGAAC TCCAACAACG CATTCTTCCT GGCGGAGAAG
GAGGCGCTCG TTTTATCCCA CCGGACGAAT ATAAGGAATT TCTACAGCTT GGTCATGGTG
GGGTCTTTGA CTTGGATCTT GACAACATCG ATGTCGCTCC CTGGCGACGC CGTGGAGCTG
AACTCAATTC CTATTTCAAT TATGGTTTCA CAGAACGATC TTGGAGACTG TACATAAAGG
AGATCCGAAG AGCTCGTATG GAGCTTCATC TAAGAAACAG CATAGAGATT GGGTTTACAG
AAAATAATTC AACTGTTGAT ACTGACTTGC CACCAGAGGT GAGACGAGCG TTGGGTGGAT
GGGAGTATGA GGGTCAGTCA AGATCGACGT CACTTCCTCC AGTGGGCTCA TCGCACGAGG
TGTTAGGAGT AAAAAATACG GAATACTTGC TCCAGCCATC TGAAAATTTC CACAATGAGT
CTCAAGTAAA CACTCAACAA CTGTACGAGG GAACACGGCC TGCACAAGTG AAAATGAACT
CACAGCAACA GTCAATGGAA GCCAAGCTTG CTGGTGGAGA AATGACGCTC GAAGAACTCC
GCGAAGAAGC CCAAAATATT CAGTCCGAAT ATCGTGCTCT TGTTGCCTCT AGCACTCTTT
CCTCGGCAAA GAATTACGAA CTACAGAGCA AGATGCTAGA GATAAAAAAG AGAATCGCTC
AGTATCAAGC ATGA
 
Protein sequence
MTGFSREKGL NEEKLFGEIF HSGETGSGAE RTRSTPESLE ERRGTEFVKH DDRKIPQPPP 
GKPRTGRESV SSRLPDGRWN TYNGQMPNAR YNELQQRILP GGEGGARFIP PDEYKEFLQL
GHGGVFDLDL DNIDVAPWRR RGAELNSYFN YGFTERSWRL YIKEIRRARM ELHLRNSIEI
GFTENNSTVD TDLPPEVRRA LGGWEYEGQS RSTSLPPVGS SHEVLGVKNT EYLLQPSENF
HNESQVNTQQ LYEGTRPAQV KMNSQQQSME AKLAGGEMTL EELREEAQNI QSEYRALVAS
STLSSAKNYE LQSKMLEIKK RIAQYQA