| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_119494 |
|---|
| Symbol | VaoD |
|---|
| ID | 5000239 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009356 |
|---|
| Strand | + |
|---|
| Start bp | 438625 |
|---|
| End bp | 439994 |
|---|
| Gene Length | 1370 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | |
|---|
| GC content | 43% |
|---|
| IMG OID | 640415660 |
|---|
| Product | vacuolar ATP synthase subunit D, probable |
|---|
| Protein accession | XP_001416146 |
|---|
| Protein GI | 145342130 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1527] Archaeal/vacuolar-type H+-ATPase subunit C |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.6467 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCAACG CGAAGAACGG TTTTTCTGAG GCACACGTGA GGGGATGTCA GACCAAACGA
CTCACCAAAC AGAACTACGC CGAACTTTCT CGATGTGACA CGTTGGAAGA CATCAAGACG
TACTTGGTAT GCACTCTAAG TTGCGCTGAA AGTTAGCGAT TGACAATAAA CAGCAAACGA
TGAGTGATTA TTCAGAATAT GTTCGTGATC TTCAAGCGCC AGTGAGACCG GTTGACATTA
TTGAATGCTG CAGAAAGAGA CAGATCGCAG AGTTTAATAT TTGCTGTCAG CAGGTTTGTA
ACGTATCTTA TTCCTGAAGA TAGCCAACAA TTGCCATAGG CTTCTTCCCC TTTGTCCAAT
TTTTTGGAGT ATTTGACGTA CGGATACATG ATCGATAATC TTGTGTTGGC TTTAAATGGC
ATGCTTCGTG GACGTACCAC AGAGGTACGC AGTCAATTTT TCAACGAAAA CCTGTCTCAA
CTGCTGTAGG CAATACTTGA GAAGTGTAGC CCCATTGGTT TTTTCGATTC TTTATCCGCG
GTTGTCGTGT CGAGTAGTGT CCAGTGAGTT CTCCTTCATT TTGACAAACA AGCTCAGATG
ATTGTAGTAC TGTGTAGAGA ACTCTACAGA CTAGCTCTCG TGGATACACC GCTTGCCTCT
TATTTCAGTA GCTCGATTAA GGCAGAAGAT CTGGATGAGT TAAATATTGA GCTCATACGG
AACGTCCTAT ACAAGGTAAA GTTCCGGTTG CATTTTGACG AAGTGACGCC TGAGGTCTGC
TCTAGGAATA TTTGCAAGAT TTCATGGTTT TCTGCAACAA AATGGATCAA AACACACGTC
AATTGATGGA GGTAACGCAA ATGACACCAC TAAATGACGG GCATTTTGAT CAGTACTCCT
ACCAGAAACT ACTTAGCATG GAGGCCGATC GGCACGCGAT AAGAATCACA CTGAACTCTT
TCGGAACAGA GCTTTCCAAG GCTGATCGAA GAAATCTTTA TACGAATTTT GGCACCATGT
ACCCCGATGG CTTCGCGCGT CTTGCGAATT GTGAAACGGT AGATGAAGTG AAACGCATAC
TAGTAGCTTA TCCAGAATTC AGAGAGTTGA CGAAAAGTGA TGATCCCCAC TACATTGACA
GGGTACGCAG TCTCTTTTTT TGTATCACAA GACTTAACGA TTTGCAGGGA CTACGCGTTC
TCGAACTGGA AGCATGTGGA CAAGCACTCG ATGAGCAATT CAATTTCGCT ATCTTTTATG
CTTTCGTAAA GTTTCAGGAG AACGAAATAA ACAACCTGAT GTGGCTCACT GAGTGTGTTG
CTCAAAGGCA AAAAAGTAGT CTAGGCGAGG GCATTGTCTA CATACAATAG
|
|---|
| Protein sequence | MFNAKNGFSE AHVRGCQTKR LTKQNYAELS RCDTLEDIKT YLQTMSDYSE YVRDLQAPVR
PVDIIECCRK RQIAEFNICC QQASSPLSNF LEYLTYGYMI DNLVLALNGM LRGRTTEAIL
EKCSPIGFFD SLSAVVVSSS VQELYRLALV DTPLASYFSS SIKAEDLDEL NIELIRNVLY
KEYLQDFMVF CNKMDQNTRQ LMEKLLSMEA DRHAIRITLN SFGTELSKAD RRNLYTNFGT
MYPDGFARLA NCETVDEVKR ILVAYPEFRE LTKSDDPHYI DRGLRVLELE ACGQALDEQF
NFAIFYAFVK FQENEINNLM WLTECVAQRQ KSSLGEGIVY IQ
|
|---|
| |