Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_119482 |
Symbol | Rpl19e |
ID | 5000300 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009356 |
Strand | - |
Start bp | 419473 |
End bp | 420267 |
Gene Length | 795 bp |
Protein Length | 192 aa |
Translation table | |
GC content | 51% |
IMG OID | 640415721 |
Product | ribosomal protein L19 |
Protein accession | XP_001416382 |
Protein GI | 145343549 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2147] Ribosomal protein L19E |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0528113 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTCTCAT TAAAGTTGCA AAAACGCCTC GCCGCATCCG TGTTGAATTG CGGTGCACGC AAGATCTGGA TGGACCCTAA CGAGGTGCGC GAAACAGCCT CCAACCCGAT CTGTAGGATC TGTACACGAT CACGTATACG TCCACGTGTA CTATACATCC CGCATTACGA CGCCCTGGGG AGCAAACACT CTAACCCATT TAATTTTGCG CTTCTTAGGT CAACGAGATC GCAGCTGCAA ACTCGCGACA AAACATCCGT AAACTCGTGA AAGATGGTTT CGTGATCCGA AAACCTACGA AGGTACGTTG TGCGAGTCGT TGCGTGACCG CGTCCCTTTG GCTAAGAACG CCTGTACTGA CCTACAAATA TGTTGTCATT ATAGATTCAC TCGCGCGCTC GTACAAAGAG AGAGCAGGCC GCCAAGCGAC TAGGCCGACA CACCGGTTAC GGTAAAAGAC GCGGTACTCG CGAGGCCAGA CTTCCCACCA AAGTACTTTG GCTTCGTCGC CACCGAGTGC TGCGCAGACT ATTGTCAAAG TACAGAGATG CGAAGAAAAT CGATAAGCAC ATGTACCACT CCATGTACCT CAAATGTAAG GGGAATGTGT TCAAGAACAA GCGGGTCTTG ATGGAAGCCA TCCACAAGGC CAAGGCAGAG AAGGCCAGAG AGAAGTCCTT AGCCGACCAG TTTGAGGCAC GAAGAGCGAA AAACAAGTCT GTTAGAACTC GTAAAATCGC GAGACGAGAG GAGCGTATCG CTGCAGGCAT AGCCGGTCTG AACACTGAAA AGTAG
|
Protein sequence | MVSLKLQKRL AASVLNCGAR KIWMDPNEVN EIAAANSRQN IRKLVKDGFV IRKPTKIHSR ARTKREQAAK RLGRHTGYGK RRGTREARLP TKVLWLRRHR VLRRLLSKYR DAKKIDKHMY HSMYLKCKGN VFKNKRVLME AIHKAKAEKA REKSLADQFE ARRAKNKSVR TRKIARREER IAAGIAGLNT EK
|
| |