| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_119465 |
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| Symbol | TraS1 |
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| ID | 5000407 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ostreococcus lucimarinus CCE9901 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009356 |
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| Strand | + |
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| Start bp | 339054 |
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| End bp | 341447 |
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| Gene Length | 2394 bp |
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| Protein Length | 797 aa |
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| Translation table | |
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| GC content | 53% |
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| IMG OID | 640415828 |
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| Product | DodoPi transposase-like protein |
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| Protein accession | XP_001416135 |
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| Protein GI | 145342107 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00345853 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCGACG CCCGCGCGGA GGCACCGCGT CGTGGGAAAG ATTTGAAATT CGAATCGGCG
TCGCGTCGAA CGAGGGCGAG GGCGTCGCGC GAAGCGTTCT CGCCCGGGTC GAGCGCGTGC
GCGTCCGAGC GTGGAAGTTT CGCGACGACG ACGACGGTCG AGAGCGCGTC GCGACGCGAT
GCGCGGGAAT ACACGCCGCC GCCGTTGACG GCGGAGGAGA TCGCAGAGAT GAACGAAGCC
GTATCTGAGC TCGTCGTCGA GAGCTCCATC CCGTTCGCGT GGACGAGCTC GCCGGCGTTC
TTCCGGTTCA TGCACGCGCT TAGGCCTGAA CTCTTCAGCG CCGCGGAGCG CGCGCGCATC
GAAAGCGGCG CGGAGCTCGT CGACCAGCCC GAGAACCTTC GATGTCGCCG TTGGCACTCG
ACAGCCGGCG TCGACGGGTT GTACGAGAAA CGTATGAAAC GCGCCCTCCG TGCGCTTGAA
GACTGGGAGG AGTTGGCGTT ATCGGCGGAT GGTTGGCAAT CTGAAGATGG CGTGAAAGTA
CTAAACTTGT CCATAACGGT GAGAGAAACT GGTCGCGAGT ACTACTGGAA GAGCGTCGAA
ATAGAAACGG AGTCAGAAAG CGCAGTGTTC ATGCAACAGA CCGCCGCGCA AGTGATGAAA
GACCTCCCAC TGAAGAAGTT CAAATGCATC ATTGGGGACA ACACCTCGCA TGTCGTCAGC
TTCTTGGAAG CTATCGCGGC TACTCCAGAG ACATCTCACA TTACTCCGAT TGGTTGCTAT
GCACATCGTT TCAACTTGCT GGCTGGAGAC GTCCACGAGA CGTTCAAATT CTTATTTCTG
GATCTAGAGC GGGCCATCAA CAAGCTCCGT GTTCAGTCTC GAATGCGCGC GCTTTTCGAC
GCGGCGCGTA AAGAGAAGAA TAGTAAGAAA CAACTTGAGA CGTACTGCCC AACGCGATGG
GCGTCCGCGC ATGCATGTCT ACACAGCTAC GTACTGAATA TCGACGTGTT CAGATTTTTG
GACGAAGACG ACGGTGTGAT CGCAAAAAAT TTCCGTAAAA TGTGTGAAAA AGACTCGGAA
TCAATCTTTA AAGTATTCTT TGACCGGGAT TCGCAGATGG CAGTCCGTAG GTTAGAGCCC
TTGTTCCGAG GTTTGGCGGC GGCAAACAAG TTTATGGAAG CTACTGGCGC TCATCTTGCG
GAAGTCTTCC CGCTGTGCTG GGCACTAGAA AAAGACTTGA GACAGTGGCT CGCGAACGTG
AAAACGAGTG CTCAACAGTC ATGGATTGAA CGTGCGACGC GCCAGTCATG GATTGAACGT
GCGACGCGCC AGCCGACACG CGATGGACTC ACGACGCCTG AGCAATTATC AGACGTACTT
CACCGAGTTT ACAAAGTGCG ATTCGAAGGA CTGGAGGCAC AGCCAGGTAA CCCAAGCACG
AAGCGCACGC CGTTGCGAGA CGAACCCCTC GTACATCTTG CATCATATTT GAGTTACATG
ATGCATGCGA GAATGCGTAT CAAACATCAG TTCGTCGTGC CGGAAGTATA TGAAGCGAAA
AAAGGTATCG GAAAGATTCA TTTCCACTTG GAGGAAAAGA AAGCAGACGT GGAAGCAGCC
AAAACGGCAT TAGAAAAACT GAACGCGGTC ACCTGTCCGA AAGCGGCACG ACCCTACCGC
GACGACTATC GCGTTCGCTT CATCGAGAAT GACGCGTACA TCCAAGCTTG CGCCGACAAA
ACGTTTGTGG ACGTTACACT GGAGCAGCTT GAGTACATCA GGGCACACAA CTGGTGGCGC
AACTTCTTGG AGCCAGAATG CGTGCAAACC TGGCCTGCAT GGAAAGATCT AATTCCTTTC
GCACGTCGTA TAAACGCGAT TGTTCCACAT AGTGCGTCTG TTGAACGCAT GAACTCGTCT
CAGAAACTTG TGCACAACAA GAGGCTCAGC TTGAGCCACG CGAATGTCCA GAAGTTGTCT
TTCATTTACT TCAATGCTAG GCATGAGCGC CGGTTATTCG CGAGTCCCTT TCATCGTTTG
GTATCAGAGA CATACGACGC AGCAGAAAGT CAAGTAGCCG CGAGTCCTGT GGTAGTTGTG
GACAGCGACA GTGATGATGG AGTTGGTGAA GATGAAATCC TCTCGTCAGA TGACGACGAC
TTAGACGAGT ACTTAAAAGA GGTAGACGAG CTCGTCATGT CGCCACACGC AAACGTTTCG
AATGGAACGG AAATGACAAG TTTAGGCAAC CTCGATGAAA CCGTGCCGGT ACAGGATGAT
GTCTCGCATC CCACTCGGAA CAAGGCAAAG GAAACTTTTG CACAGAAGAC AGCTCGCAAG
GCATTAGAGC GTCAAGAGAA GAAGAGACGT AGTAAGAGTA GAAGATTGCA ATAG
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| Protein sequence | MRDARAEAPR RGKDLKFESA SRRTRARASR EAFSPGSSAC ASERGSFATT TTVESASRRD
AREYTPPPLT AEEIAEMNEA VSELVVESSI PFAWTSSPAF FRFMHALRPE LFSAAERARI
ESGAELVDQP ENLRCRRWHS TAGVDGLYEK RMKRALRALE DWEELALSAD GWQSEDGVKV
LNLSITVRET GREYYWKSVE IETESESAVF MQQTAAQVMK DLPLKKFKCI IGDNTSHVVS
FLEAIAATPE TSHITPIGCY AHRFNLLAGD VHETFKFLFL DLERAINKLR VQSRMRALFD
AARKEKNSKK QLETYCPTRW ASAHACLHSY VLNIDVFRFL DEDDGVIAKN FRKMCEKDSE
SIFKVFFDRD SQMAVRRLEP LFRGLAAANK FMEATGAHLA EVFPLCWALE KDLRQWLANV
KTSAQQSWIE RATRQSWIER ATRQPTRDGL TTPEQLSDVL HRVYKVRFEG LEAQPGNPST
KRTPLRDEPL VHLASYLSYM MHARMRIKHQ FVVPEVYEAK KGIGKIHFHL EEKKADVEAA
KTALEKLNAV TCPKAARPYR DDYRVRFIEN DAYIQACADK TFVDVTLEQL EYIRAHNWWR
NFLEPECVQT WPAWKDLIPF ARRINAIVPH SASVERMNSS QKLVHNKRLS LSHANVQKLS
FIYFNARHER RLFASPFHRL VSETYDAAES QVAASPVVVV DSDSDDGVGE DEILSSDDDD
LDEYLKEVDE LVMSPHANVS NGTEMTSLGN LDETVPVQDD VSHPTRNKAK ETFAQKTARK
ALERQEKKRR SKSRRLQ
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