| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_92236 |
|---|
| Symbol | |
|---|
| ID | 4999633 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009355 |
|---|
| Strand | + |
|---|
| Start bp | 1089980 |
|---|
| End bp | 1090846 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | |
|---|
| GC content | 60% |
|---|
| IMG OID | 640415054 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001415685 |
|---|
| Protein GI | 145341167 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
|---|
| TIGRFAM ID | [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.000528701 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCGCG AAGGCGATCC GAACGGCGCC TCGCGCGCGC CCCTGCGCGC GGTTTTCTTC
GACTTTGACG ACACACTCGC GGAAACCACC CTGGCCGATC GCGTCGCGTA TCGCGAATGC
GCGATTCGCA TGGAGACCGT ATACGGGCTG TCGAAAAAGC GACAAGATGA AGTGATCGCT
GCGTACAAGC GGCGGCTCGC GGAGCGTCCC TGGAACGACG AGTTTGCGCA CGTGTGGACG
CACCGCGAGC GGCTGTGGGC GGAAGCGTTC GGCGACGACG ACAGAGGGCT CGCAATGCGG
CACGACGTGA ACAGCACATT TAGGGACTGT CGCTTGGAAC AGCTACGTTT AAACAGTTCT
GTGTGCGGTG GCATCGAGAA GTTGCGCGCG AAGAATGTGC ACGTCGTCAT CATCACGAAT
GGCCACCACG TCGTGCAGCG AGAGAAGCTC GCCGCGTGCG GGATATACGA AGTAGTGAAG
TTGGAAAACA TCCTCGTCGG TGGCGAAGAA GTTCTCGCCG GTCGCGACGA GAAACCAGAG
GCGTCCATCT TTCACGAGGC GTGCAAACGC GTCGACGTGG TACCAGACGA AGTTATGCAC
GTAGGCGACT CGTGGACCGC CGACATGGTC GGCGCCGAAA ACGCTGGTCT GCGTTGGAGA
GTGTGGGTGT CCCAACGTCC CGACGACGAG AAGTGCGAGA GCGAACAGGA ACTGTCATCG
TCGAAGCGAG CGAAAAAGGT CGACGCCGTT CCGCGCGTAG AAAACATCAA AGAATTTTTC
GAGCTCCTGG ACGAGTGGTT GGACGAAGAC GGCACGCTGC CCGCATCCAA CATTCTCTTG
AAGACGCGGA GCCGTAGCGA GCGTTAG
|
|---|
| Protein sequence | MSREGDPNGA SRAPLRAVFF DFDDTLAETT LADRVAYREC AIRMETVYGL SKKRQDEVIA
AYKRRLAERP WNDEFAHVWT HRERLWAEAF GDDDRGLAMR HDVNSTFRDC RLEQLRLNSS
VCGGIEKLRA KNVHVVIITN GHHVVQREKL AACGIYEVVK LENILVGGEE VLAGRDEKPE
ASIFHEACKR VDVVPDEVMH VGDSWTADMV GAENAGLRWR VWVSQRPDDE KCESEQELSS
SKRAKKVDAV PRVENIKEFF ELLDEWLDED GTLPASNILL KTRSRSER
|
|---|
| |