Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_805 |
Symbol | |
ID | 5000002 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009355 |
Strand | - |
Start bp | 543583 |
End bp | 547272 |
Gene Length | 3690 bp |
Protein Length | 1175 aa |
Translation table | |
GC content | 55% |
IMG OID | 640415423 |
Product | predicted protein |
Protein accession | XP_001415858 |
Protein GI | 145341527 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4581] Superfamily II RNA helicase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.260379 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GCTGGAGATT CGAGTTCGTT GGCGCGTTCG CCCGCGCCGC AGAGCGATTT CGTGCGAGGT TCGTTTAGTC AAGTGCCGTT CACGCCGGGA GGAGAAGGAT GGGACGCAGC CGCGCGAGAG AGCGCGGCAA AGCGTATGGA GCTGGCGAGT CGCGCGGGAA AGGCGTGGTT GGAAGAGTTT GAAGCGGGGA CGTATCTCTC AGCGTCGACT CTACCAAACA CGCTGCACGG GATGCGAGAA ATGTTTGATT TAGACAGTGG CATGGAGCAA ATGGAGCTCG AGCTTGAAAA GCTGACAGTG ATGGACGATG AAGAGTTACC GATGTCGTAC GACGATTTAT TCATCGATGC GCTTCGCGGC GCTGTTCGAC CGGAGGAATC ATCGAGCGAG GAGGATGACA CGGAGGACGA AACGGAGGAC GAAACGGAAG AGGACGGCGA AGCGGTCGAC GAAGTCACGC TCGAAGGCGA AGCCGAAGTC GAGGCATTAC TGAACGGCAC AAAATCCATT ATTGCGGCTC GAAGGCGAAG TAAGTCGAGG AAGAAGAAAG GAGAGACATG GGCCGTCATG GAGAGATTTG ACGACGTTCA GGAAGCGTAT AGACGCGAGG TACCCGAACC GGCGCACGAT TTCCCATTCG AACTCGATTT ATTTCAGAAA GAAGCCATCG TCCACTTGGA AAAGTCCGAG AATGTGTTCG TTGCAGCGCA CACTTCCGCG GGCAAGACCG TGGTTGCGGA ATACGCCTTT GCGCTGGCTA CGAAACACTG CACGCGCGCC ATCTATACGT CTCCAATCAA GACGATTAGC AACCAAAAGT TTAGAGATTT TGGGAAGATG TTCGACGTCG GCCTGTTGAC AGGTGACGTT TCCATCAAAC CAGAAGCGGC TTGTCTCATC ATGACGACGG AAATTTTGCG GAGTATGCTG TATCGAGGCG CGGATCTGAT ACGCGACGTC GAATGGGTTA TCTTTGACGA GGTGCACTAC GTAAATGACG CCGAGAGAGG TGTCGTGTGG GAAGAGGTCA TCATCATGCT TCCCGCGCAC GTTGGTTTGA TTTTGTTGTC TGCCACGGTA CCAAACGTTT TCGAGTTTGC TGATTGGGTT GGAAGAACGA AGAGAAAGAA AATATTCGTC ACGGGAACGA AGAAGCGACC TGTGCCGCTC GAACACTGCA TCTACTTCGG AGGCGATAAG GAGAAGGACT TTTACAAGGT CGGAGAGCAC GAAGCATTCT TGCCGACTGG GTATAAAGTC GCGTCAGATG CGCACAAAAA GAAGCTACTT GGTAACAAAA CGACGACGGC AACACCAGCA AATGCGCAAG CTGCGAAACA AACCGCGCTC GCCGGACGGG GCGGCCGTGG TGGAGCCCAA CAAGGGCGAG GAGGCCGAGT GGGCGGGCGC GGAGGAACCC AAAACGTCAC CGGTGGACGA GGAAGCTCGT TTGGACCCAA CGCTGGGCGC GATAAGAATA TGTGGGTAGA GCTCATTCGC AATCTTGAAC GTCGAGAACT ACTACCCATG GTTGTATTTG CGTTTAGCAA GAAACGATGC GACACTCTCG TCGACAGCCT GACGTCGATG GATCTCACAT CAAGCTCTGA GAAGCACGAA ATCCACGTAT TTTGTGAACG CGCGCTGAGT CGATTATCCG TCACCGACCG CAAGTTACCG CAAGTCCTTC GCGTGCGCGA ACTCCTTCGT CGAGGTCTCG GCGTGCATCA CGCTGGTCTA CTGCCAATCG TCAAGGAGAT TGTCGAGATG TTGTTTTGTC GTGGTTTGCT TAAAGTTCTC TATTGCACGG AAACTTTTGC GATGGGTGTA AACGCTCCAG CTCGTTGTGT GTGCTTCCAA AGTCTGCGCA AACATGACGG GCAAGATTTC AGAGGTCTTC TAAGTGGTGA ATATACGCAA ATGGCTGGCC GCGCTGGACG TCGAGGCCTC GACACAGTCG GCACCGTCAT CTTGGCAGCT TGGGAGAACT TTCCTCCAGA ACTTGAGCTT CGTCAGTTGC TGTCGGGTCA AGCAACGAAA TTGCAGTCAC AGTTCCGATT GACGTACGGC ATGATTCTCA ACCTCATGCG AGTCGAGGAC TTGCGCGTCG AGGATATGCT CGCGCGCTCG TTTGCCGAAT TCCATGCACA GCGCAGCGTC ATAGATCGAC GAGGCGATCT CGCTATCGAC ACCGCTGCTC TTCGCAAAGT AGAGTCGCTC ATGCAAACTG AAGCGCAGTT TTCACCGGAT GAATGGCAGA AAGCCGTTCA TTGGGACGAC CATGCGAGAG AGATTGCACG AAGCGTGGAG CACGTGAGAG AAGCCATCAT GACGAGTCGA GGGGCGCAAA ACGCACTCAG CCCGGGAAGG GTCTTGCTCG TCGCTCCTGA AGGCGAGGGA GGTGAGAGTG TGGACGGACT ACCAAGAGGT GGTGTCGCAA AACATTGCGT GCTCCTGCGC GTGGTGACTT CTGCGACGAA TGGAAAGTCT TTCGTGGTTC TTGTTTCGTG TCCTGAAGGC CATGCCTCCA AAGGTGTCGC CGAAGCTGAA GACGCTGCCC GAGACAACGC ACCCACGGCG ATGAAGTCCA TGAATAGTAA GGACAAAGAT GACGACGATG ATTTCTTCGG CATGTCCAAG AAGTCCGCCG GCGGAGGTAA GCGCGGTGGC ACGACCTCAA ATAAAATGCC CGACGGCCTT CCGTGGTTTC GACAAGCGGG CGGCATCGAT TACATTGTCG CGAGCGTTCC TGAGACCGCG ATACTCGCTA TCACGACTAG TCGGTTGAGC GTAGAAGCGG ACGCAATACT AGATGGTAGT GGTGACGTAG CGGCGACTTC TCGAGCGCTC CTATCGATGG AGAAATTGTC GAGTGAGACC TCGTTTGAAG CTCTCCACCC GCTCAAGGAT TTGAAGATAC AAGACATCGT CACCGTGGAA GCTTGTCAGC ATCACGCCGA CTTGGTGAAG AGCTTGCCCC CGAGACCGGT CGCATCGGCG CAGAAACTTC GTGAATGGTC GGCGTTGCTG CGAGCAAAAC ATGTTCTCAC TTCTCGTGTC GCCGAGCTGG AGTTCGGATT GTCAGACGCA AACTTGCTCC AAATGCCCGA TTTTGAAGCG CGCGTCGCTG TGCTCCAGCG CATGGGCTAT CTCGACGAAA ACAGGACGGT GACGTTGAAA GGTCGCGTGG CGTGTGAAAT TGCCACTGGG GACGAGCTCG TCGGAACAGA AATTATATTT GCGGGCGTGC TCACGGATAT ACCTTCAGAG GAAGCCGTGG CGCTTCTCGC GGCGCTCGTC TTTCAAGAAA AGAATGCTTC CCCGCCCAAC CTCGAAGGCT CGCTCAAAGC GGCGTGTGAT CGCGCGAAAG AGCTAGCGTT TGCCGCCGGC GAGATACAGA TGGCACATGG TCTACCGATT GCGCCTGATG AATTCGTAGA GACGACCATG CGCTTTGGTT TATCCGAAGT CGTCTACGAG TGGGCGCGCG GCACGCCGTT CGCGGACATC TGTCAGCTCA CCGACGTGCA AGAGGGAAGC GTCGTTCGCA CCATCGTTCG ACTCGATGAA ATGTGCCGCG ACGTGAGGAA CGCGGCGAGA ATCATGGGCG ATAGCACCTT GTTCGCGAAA ATGGAAGAAG CGAGCGCGGC GATTAAACGC GACATTGTCT TCAGCGCGTC GCTCTACGTC
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Protein sequence | AGDSSSLARS PAPQSDFVRG SFSQVPFTPG GEGWDAAARE SAAKRMELAS RAGKAWLEEF EAGTYLSAST LPNTLHGMRE MFDLDSGMEQ MELELEKLTV MDDEELPMSY DDLFIDALRG AVRPEESSSE EDDTEDETED ETEEDGEAVD EVTLEGEAEV EALLNGTKSI IAARRRSKSR KKKGETWAVM ERFDDVQEAY RREVPEPAHD FPFELDLFQK EAIVHLEKSE NVFVAAHTSA GKTVVAEYAF ALATKHCTRA IYTSPIKTIS NQKFRDFGKM FDVGLLTGDV SIKPEAACLI MTTEILRSML YRGADLIRDV EWVIFDEVHY VNDAERGVVW EEVIIMLPAH VGLILLSATV PNVFEFADWV GRTKRKKIFV TGTKKRPVPL EHCIYFGGDK EKDFYKVGEH EAFLPTGYKV ASDAHKKKLL GNKTTTATPA NAQAAKQTAL AGRGGRGGAQ QGRGGRVGGR GGTQNVTGGR GSSFGPNAGR DKNMWVELIR NLERRELLPM VVFAFSKKRC DTLVDSLTSM DLTSSSEKHE IHVFCERALS RLSVTDRKLP QVLRVRELLR RGLGVHHAGL LPIVKEIVEM LFCRGLLKVL YCTETFAMGV NAPARCVCFQ SLRKHDGQDF RGLLSGEYTQ MAGRAGRRGL DTVGTVILAA WENFPPELEL RQLLSGQATK LQSQFRLTYG MILNLMRVED LRVEDMLARS FAEFHAQRSV IDRRGDLAID TAALRKVESL MQTEAQFSPD EWQKAVHWDD HAREIARSVE HVREAIMTSR GAQNALSPGR VLLVAPEGEG GESVDGLPRG GVAKHCVLLR VVTSATNGKS FVRGGTTSNK MPDGLPWFRQ AGGIDYIVAS VPETAILAIT TSRLSVEADA ILDGSGDVAA TSRALLSMEK LSSETSFEAL HPLKDLKIQD IVTVEACQHH ADLVKSLPPR PVASAQKLRE WSALLRAKHV LTSRVAELEF GLSDANLLQM PDFEARVAVL QRMGYLDENR TVTLKGRVAC EIATGDELVG TEIIFAGVLT DIPSEEAVAL LAALVFQEKN ASPPNLEGSL KAACDRAKEL AFAAGEIQMA HGLPIAPDEF VETTMRFGLS EVVYEWARGT PFADICQLTD VQEGSVVRTI VRLDEMCRDV RNAARIMGDS TLFAKMEEAS AAIKRDIVFS ASLYV
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