Gene OSTLU_40147 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_40147 
SymbolRPS13 
ID4999573 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009355 
Strand
Start bp580349 
End bp580807 
Gene Length459 bp 
Protein Length152 aa 
Translation table 
GC content60% 
IMG OID640414994 
ProductRibosomal protein S13, component of cytosolic 80S ribosome and 40S small subunit 
Protein accessionXP_001415540 
Protein GI145340869 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0184] Ribosomal protein S15P/S13E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTCGCA TGCACACGCC CGGGAAGGGC ATGTCCGGCT CCGCCTTGCC CTACAAGCGC 
TCGGCGCCGA GCTGGTTGAA GGTCACGCCG ACGGAGGTGA CGGAGATGAT CACCAAGATG
GCGAAGAAGG GCATGACGCC GTCGCAGATC GGCGTGGCGC TGCGCGATAA CCACGGCATC
GCGCAGGTGA GCTCGGTGAC GAACTCGAAG GTTTTGCGAA TCTTGCGGGG GCAAGGGCTC
GCGCCGGGGA TTCCGGAAGA TCTTTATTGT TTGATCAAGA AGGCGGTGAG CGTGCGCAAG
CACTTGGAGC GCAACCGTAA GGATATGGAC TCCAAGTTCC GCTTGATTCT CATCGAATCT
CGCATTCACC GCTTGGCGCG ATACTACAAG CTCGCCAAGA AGCTCGAGCC GTCGTTCAAG
TACAACTCGG CGAGCGCCGC GACGCTCTTG ACGACGTAA
 
Protein sequence
MGRMHTPGKG MSGSALPYKR SAPSWLKVTP TEVTEMITKM AKKGMTPSQI GVALRDNHGI 
AQVSSVTNSK VLRILRGQGL APGIPEDLYC LIKKAVSVRK HLERNRKDMD SKFRLILIES
RIHRLARYYK LAKKLEPSFK YNSASAATLL TT