| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_39979 |
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| Symbol | |
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| ID | 4999948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ostreococcus lucimarinus CCE9901 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009355 |
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| Strand | - |
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| Start bp | 150539 |
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| End bp | 152035 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | |
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| GC content | 58% |
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| IMG OID | 640415369 |
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| Product | IISP family transporter: signal recognition particle protein (SRP54) |
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| Protein accession | XP_001415746 |
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| Protein GI | 145341290 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0541] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCGCG CGGATGCGTT CGCGGGAATG TCGGACAAGC TGGATAAGGC GTGGGCGCGC
TTGCAGGGCG AGAAGGATTT GAACGCGGAT AACGTCAAGG CGCCGCTTAA GGATGTGCGA
CGCGCGCTTT TAGAGGCTGA TGTGTCGCTG CCCGTGGTGC GGCGGTTCAT CGCGCGGTGC
GAGGAGAAGG CGGTGGGAAT GAAGGTGACG AAGGGCGTGG AACCGGGGCA AATGTTGGTC
AAGTGCGTGG CGGATGAGCT TTGCGAGCTC ATGGGTGGCG TCGGAGCGGA AGGGATCAAG
TTCAGGGACG ATGGAGAGCC TACGGTGGTT TTGATGGCTG GTTTGCAAGG GGTCGGGAAG
ACGACGGCGT GTGGGAAGTT GTCGTTGGCG TTGCGCAAGC AAGGGAAGAG CGTGTTGCTC
GTCGCGACGG ACGTGTATCG ACCGGCGGCG ATCGATCAGT TGAAAACGCT CGGGAAGCAA
ATCGGCGTGC CCGTTTTCGA TATGGGTGTC GATGGCAACC CGCCGGAGAT CGCCGCGAGA
GGCGTGCGCA AGGCGAAGGA TGAGGACATA GACGTCGTCA TTGTGGACAC GGCGGGTCGA
TTGAACATCG ACGAAAAGCT CATGGGTGAG CTCAAGGCGA CGAAAGAGGC GACTTCGGCG
GATGAAACCT TGCTCGTCGT CGATGCGATG ACTGGTCAAG AAGCGGCGAC GCTCACGGCG
TCGTTCAACG AAGCGGTTGA AATCACCGGA GCCATTCTCA CTAAGATGGA TGGCGACACA
CGAGGCGGCG CTGCGTTGAG CGTACGAGAA GTCTCGGGTA AGCCGATCAA ATTCACGGGC
GTGGGCGAAA AGATGGACGC CCTCGAGCCG TTTTACCCTG AGCGCATGAC TAGCCGCATC
TTGGGCATGG GTGACATCGT CAGTCTCGTC GAAAAAGTGC AGGCGGGCGT GAAGGAGGAA
GAGGCGGAGA AAATCAAGCA GAAGATTATG AGCGCGACGT TTGATTTCAA CGACTTTGTT
GGCCAGCTTG AGATGATGAA CAACATGGGT GGGATGAAGC AAATCATGCA AATGATGCCG
GGCACCGCCA AGCTGAGCGA GGCCGACATG GAAGCGGCGG GGAAGAGCAT GACCATCGCG
AAGAGCTTGA TCAACTCGAT GACCAAGGAG GAACGACAGT ACCCAGACAT GCTCGTCGCC
AGCACGACTG CGGATTCCCG CCGTCAACGC ATAGTCAAAG GTAGCGGCCG CACCGAAGCG
GACTTAGCAC AACTCATCAT GATGTTTGGA GGTATGCGTA CCCAAATGCA AAAAATGAGC
GGGCAACTCG GCGGCCAAGC CGGCGACGTG GGCTTGCAGC CTCAGCTTTC TGAAGCCGAG
CTCAGCAAGC TCGCTATGAA CAAGATCCGC AAGACAGTCA AACCGGGCAT GGTGCGACGG
CAGAAGGCTA AGAAAGTGCC TAAATTTTTA GCGGAGCGCG AATCATTCTC ACAGTGA
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| Protein sequence | MTRADAFAGM SDKLDKAWAR LQGEKDLNAD NVKAPLKDVR RALLEADVSL PVVRRFIARC
EEKAVGMKVT KGVEPGQMLV KCVADELCEL MGGVGAEGIK FRDDGEPTVV LMAGLQGVGK
TTACGKLSLA LRKQGKSVLL VATDVYRPAA IDQLKTLGKQ IGVPVFDMGV DGNPPEIAAR
GVRKAKDEDI DVVIVDTAGR LNIDEKLMGE LKATKEATSA DETLLVVDAM TGQEAATLTA
SFNEAVEITG AILTKMDGDT RGGAALSVRE VSGKPIKFTG VGEKMDALEP FYPERMTSRI
LGMGDIVSLV EKVQAGVKEE EAEKIKQKIM SATFDFNDFV GQLEMMNNMG GMKQIMQMMP
GTAKLSEADM EAAGKSMTIA KSLINSMTKE ERQYPDMLVA STTADSRRQR IVKGSGRTEA
DLAQLIMMFG GMRTQMQKMS GQLGGQAGDV GLQPQLSEAE LSKLAMNKIR KTVKPGMVRR
QKAKKVPKFL AERESFSQ
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