| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_29147 |
|---|
| Symbol | |
|---|
| ID | 4999485 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009355 |
|---|
| Strand | - |
|---|
| Start bp | 897862 |
|---|
| End bp | 899601 |
|---|
| Gene Length | 1740 bp |
|---|
| Protein Length | 438 aa |
|---|
| Translation table | |
|---|
| GC content | 61% |
|---|
| IMG OID | 640414906 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001415968 |
|---|
| Protein GI | 145341754 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2319] FOG: WD40 repeat |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.128359 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CGCGCGCGGC CGGCGACGCG CCGAAAGACG CGCGGCGCGA CTTCGAGCGC GAGCGACGGT
ATCGGCGCGC GCGCGAGCGG GGCGTGACGA GCGATCGAAC GCCCGCGCGC GACGTGAGGC
GCCCTCGGGC GACGACGAAA AAGCGCAGCC GCCGGCGCTC GCCGACGCGA AGTCGTCGAC
GACGCGCGAC GGCGCGCGGG AAACCGCGAG GGCGATGTCG AACGAGGACG CGAGCGATGT
CGAGATCGCG GTGAGCTTCG TCACGCGCCT GCCCGAGGAG TTTCGCGTGA GTGAGAGCGC
GATCGAGGTG CCGGGCCGGC TGACGAGGTA CGGCTTGAGC GAGGTGGTGA ATCACCTGCT
CGGCGCGACG ACGCCGACGC CGTTTGATTT CCTCATCGAT GGAACGCTTT TGCGCACGTC
GCTGGCGAAG TTGGCGCTGA GGCTCGGGAA GAGCGCGGAG GCGACGCTGG TGGTGGAGTA
CGTGCCGGCG CTGGGACCGC CGACGGCGGC TGAGACGACG AAATGCGAGG CGTGGGTGAG
CTCGATCGAT GGAAGTTGGG CGAAAGCGGT CGTCACGGGG TCCTTCGACG GTAAAGCACG
GTTGTGGTCA CCCGTGGGTA AGTTGCTGTG CGAGTTGGAA GGCGCGGAAG AGCGCGTGTG
CTCGGTGAGC TTGGCGCCGC CGAGCGCCGG CGCGGACGCA GAAAACGCGT GTGTGGTGTT
AGCGGCTTCG GCGGATCACA CCTTGCGATC GTATGCGGTG ACGCTGACTG GGAAAAAGTG
TGAACTCGGG GAGCAGCGTG TTTTCAAGGG TCACGAGGGC ACTGTGACGG ACGTCGCGAG
CGCGTACGGC GCTCGACTGT TCGCCTCGTG TTCCGTCGAC TGCACGGCGC GAGTGTGGAA
AATCGACGGT GGCGAGTCGG CGAACGAAAA GGTAACGAAG AAGCGCAGAA CATCGAAGAA
ATCGGAGGCT ACAGACGACG ACGCGATGGT CGACGATGCG AGCGCGAAAA TTGGTCTCGG
CGAGGAGCTC GTGTTGCGTG GGCACACGGA TCAAGTGCGA GCGGTTTCCT GGGAAAGCCC
GCAAGTACTT TGGACCGGCG CATACGATAA TACGATCCGA GCGTGGGACG TGGAGACTGG
CGAAGAGAAG GAGTCTCATC ATACGAACAG TTCAGTCCAT ACCTTGGATG TCTCGAGGGG
AGGAAGTAGG TTCGCTTTCG GGGGGAGCGA CCGCCTGGTT AACGTGTGGG ATCCGCGAGA
GTCGGCGTCG GCAAAGGCGT GCCTGAAGCT CAAATCTCAC GAGGTAAGTT TGTCGTCATG
TGTACTCTCG CTCGCGCTCG CGCCCGTTCG CAAAGTCAGT GATGAACACA CTTTTGATTC
CCGACACTCG TGCGTGAGGG CACAATCAAT CACTCTAATT TTTTACTGAG ACTTTGCGAG
CGGCGCGCAA AAATTTGTTT CGCGGAATGA ATTGTTTCGC CGATTGACTG ACGCGCGCGA
TTTGAAACGC AGGGGTGGGT GTCGTGCGTT CGATGGAGTC CAACAAACGA GCATCACATC
GTGAGTAGTG GATACGACGG AAAAGTCAAG TTATGGGATA TTCGTGGTAG AGTGCCACTG
CACAGCGTTT CGTCGCACGA CGGGAAAAAC TTCGCCGTGG ATTACCACGG AGGCGAACGG
CTGTGCAGCG GCGGCGACGA CGGACAGCTG AGATTTTGGA ACGTAGGTAG CTCTAAATAA
|
|---|
| Protein sequence | MSNEDASDVE IAVSFVTRLP EEFRVSESAI EVPGRLTRYG LSEVVNHLLG ATTPTPFDFL
IDGTLLRTSL AKLALRLGKS AEATLVVEYV PALGPPTAAE TTKCEAWVSS IDGSWAKAVV
TGSFDGKARL WSPVGKLLCE LEGAEERVCS VSLAPPSAGA DAENACVVLA ASADHTLRSY
AVTLTGKKCE LGEQRVFKGH EGTVTDVASA YGARLFASCS VDCTARVWKI DGGESANEKV
TKKRRTSKKS EATDDDAMVD DASAKIGLGE ELVLRGHTDQ VRAVSWESPQ VLWTGAYDNT
IRAWDVETGE EKESHHTNSS VHTLDVSRGG SRFAFGGSDR LVNVWDPRES ASAKACLKLK
SHEGWVSCVR WSPTNEHHIV SSGYDGKVKL WDIRGRVPLH SVSSHDGKNF AVDYHGGERL
CSGGDDGQLR FWNVGSSK
|
|---|
| |