| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_29038 |
|---|
| Symbol | BRWD3501 |
|---|
| ID | 4999674 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009355 |
|---|
| Strand | - |
|---|
| Start bp | 721654 |
|---|
| End bp | 725499 |
|---|
| Gene Length | 3846 bp |
|---|
| Protein Length | 1281 aa |
|---|
| Translation table | |
|---|
| GC content | 57% |
|---|
| IMG OID | 640415095 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001415913 |
|---|
| Protein GI | 145341638 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2319] FOG: WD40 repeat |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.985695 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGTCTC GCGTTCGCGC GCGCGGCGCG CGCCAGGACG AAGCGCAGGA CGCGCCGTCG
TCGTCTGACG CCGCGCGCGG CGCGAGCGGT GCGTCGGCGC GTGCGAGCGA CGACGACGGC
GCGACATCGG TCAATGCCGA ATTGGAAACG TTCATCGTCG CGCGCTACTT GCGCAGGCGC
GGACGCGCGT TCGCGAGCGT CGCGAGTGAT TTCGAACGCA CCGCACGCGC GAGCGGGGCG
TTCCCGCGCA GGCTGGACGT GTTCGGTGAG GCGCACGATG CGAGTTTCGA GGATTTGGCG
CGCGGCGCGT TCGCGAATGT GCCGGAGGAC GCATTAGAGC GCGCGGTGGC GCGCGCGCGA
GGAGCGACGC ACGGACGAGT CGATTTTAGA GATGAAGGTG GTAGTGGTTC GGTGTGCGCG
CGCGCCGAGG GGCAAAAGCG TTTGCGAGGG GCGTTAGTCA GGACTTTGAT GCGCGAGACG
GCGGCGACGG GCGGTTGTCG GGTGGAGGCT TTGGCAGAGA CGAAGACTGT CGCGAAGAAT
ATGAATTGTC TTCGCACGCT TCGCGCGCAC AGAGATGCAG CGTATTGCGC GGTGCTGAGC
GCGAGCGGAA GACGGTTGGT GACGGGTGGG GACGATCGGT TGGTAAAAAT TTGGTGCGCG
TACAACGGTT TGCTTCGCGC GGCGTGTCGA GGGCACGTCG GGGAGATTAC GTACGTAGCG
ATCGATTCGC GAGAGGAAAT CGTGGCTTCG TCGTCGACGG ATACAAGTAT TCGGACCTGG
GACTTGGAAA GTGGCGCGCC CATCGCCGTG CTTCTTGGCC ACACGCGTTC GATTACCGAG
TTGCACTTTT GTCCATCGGT GCCGCACGTG TTGTTGAGTA CGGCAGACGA CGGCACAGTT
CGTTTATGGA GCGCTCGACG AAGTTCGAAC GACGTGAAAC CAATGGTGAT AGATTTGAAC
GTGAACGGAG GGGCAATCAC CGGCGGTAGA GTGGTAGAAC ATGGTGTCAT GCCTCTGGCA
GCGATGGCGA ATGAAGCAAC GTCTCCGGGC ATGCGCACTC GCGGCGCGCA ACTCAACGCA
ATCGCGGATG AGGCGAGCGC AGAGCGCGAC GGCGAGGCGT GTCAAATAGT CTGTGGTGCG
TTCAACGACG TCGGTGATAC GTTTGCCGTC GGTACGAGTA TGTGCAAGGT GTTTATGTGG
AAGCTTGATT TAGAACAGTT GCGCTCGTCT GGAGACTGTT CTCCTACGGA GAATGCGGTG
AAGAAGATTT CCTTATCTGG ATCGCATTTG AACGATGTGG TGTCGGTGCA CTTCTCACAC
TCGGGTGACA TGCTGTTATC CGCGTCCAAG GACGGGCAGG CGAGGATATG GGTGCCGAGT
TCGAGCGCGT CTCTCCCTGG GCGCGCTCGC TTGTCTTGGG TGCTTCGATC GACGTTGACG
ACGCCGGAAG ACGCCGCTGC GTTGCGGGAA CAGCAACGCA TCGGCGCTAT TACCTCACAG
CAGTACTCGA GGCGCGCGCC AAAAGTACCA AACATGCATA TCGCCGTGTG GTCGACCGAT
GACACGCGCG TCATAGCTTC CATGGGAGAT CAAAGTATTC GCGTCTGGGA CGTCGCGTCT
GGTGAGTTGC GACACGCGAT GCGCGAACAC ACCGCCGCAA CGTACGTTAT TCAATCCAAT
CCATTAGATC CTCGATTGGT GATGAGTGCG AGTTACGATG GTAAAGCCGT GATATGGGAT
ATTGTTGAAG GCGTCGCGCT TCGTGTCTTT GATGGATCTC AGTACCACAC CAAACTCGTC
GACGGCAATT GGCATCCAGA CGGCACATCC ATCATCTGTT CTGATTTATC CGGTCAGTTC
TCCGTCTTCG GCACTGGCGA TAGCGTGCGA CTACTTCGTG CGAAGTACGA GCAGTTCTTG
CAGACGGAGT TCGTGGGTGA TGACGCGCTC GGTCGAAGCG AGGGCGGGCA TTTGATAGAG
CTCGCCACCG GTGCGCTCCT TCACGAAGCG TACCCGAGAA ACTTGCTTTG CGACGCCATG
GGTGATCCGT ATCCCGACCC TTACCAGTCG GCGTTTCAAT CGGGGCAGGT TGCAGCGTGC
TTGCCATCAG CGGATTCGGG GATGCCGGAT GTCGTCGTGC AAGCCCCGAC TTTAGCCGAA
CTAGCGCCGA CAGACGTGCA AGGTCCGTGG ACTGCTCAAG ACGAAACGAT GCCGATGCAA
GAGATCATGT ATAGAATGTC CGACGACGAG AACGATGGAG TGAATGAAGA CAACATAAGT
GACGCCGACT TTGAAGAACC TGATGATGAA GACGAGTCCG ACTACGATAC CGATGCAGAA
CGTCGCGCAC GCTCAGCACG CAGCCGAAAT CGCGCTGTGC GCTCGCGTCG GCGGCGGCGC
GCGCGCCGTT TCGACTCGGA TGAGTCAGAA GAATCAGATG ACTCAGAAGA TCGCGCGACT
CGCAGAAGTG CTCGAGAGCA TCGCAAACCA CAGCGTTTAG GCGTAGATGC GTACGAATCG
ACGAGTGATG AAGAAGAAGA CGCGCCGGCG AGAATCACTC GCAGACGCCG CCGGGAGCTC
GAAGAACTCG GGATCGATCC TGACGAGGTC AAGAGCGACG ACGTTTCCGA GGAAGAGGAA
GGTAAGAGAC CTGCGAAACG AGTAAAAAAG TCAGTGACGT CTCGCCACGA TATCCGTCTG
TTAGATGCGT ACTCTTGGCT GTGCGCTGAG GAAGTTATTG TCGGCATGTA CGTTCCGCAA
CTGGGAGATG AGTTGGTGTA CGTAGCCCAA GGCCACTACG AGCGCATGCA AGCGACGGGA
AAGAACTGGC GCGATGAGGC ACCGTGGCAA ACGCTTACAT CGATGCGGTT CGTCGAGCCT
TGTACCGTTT CGTCATTGCG TTACATGATA TCCGACGACG GCGCTTACGA AACGCGCTGT
TTGCTCGAGT TGAAGCTCAT TGATCCTGCT TGTGGTGATT ACGGAAAAGA GTTCCTTGTC
GAACTCCAGA AAAGTGATAC ACCAGACTTT CTTGTTCCGA TTTCACGTTA TCAAACGGCA
GAGCAACATT CGTGGAAACG AGGCGACTAT TGCGCGGCCC TGTGGGACGA CACTGGTCTC
GGCGACATGT CGCCGTGGTA CGGGATGGTT CACGACGCAC AAAGCAATGA AGGCAAATGG
ACTGGGTCAC CGTGGAACAC GCTATGCGTG CAGTATTTGA ACGTGCAGAA TGAAGACGAT
AAGTTCATGA ATCATAGCTT TTGGGAGCTG TACAACGACG AGGCGATGAA AAAGGAGCAC
GCGAAGTCGT TTTCAGACGC CTCAACATCG CGTGGGCCGC AAAAGGCCAA ATTTGCGAAC
GTCGATGAGA ACTATCCATC GCTCAGTGCA AGCGTGACGA AAGATTTGGT CGCTCGAGTG
CAGAGAATCA TTCGAAACTC GAGATTTGCG GCTTTCGTCG AAGCCATCGG CCCGAACGAA
CGCTTCGCTC GAGCAGACGG CGCAATGACG AATTATTGCT CTGTCGTCCC AGCGCCCATG
AGCTTGAAGC TCGTCATGCA ACGATTAAAA AGTGCGTACT ATCGGCAGAT TGGTGGATTT
CGTTCCGATA TCGAGCTCAT TCGTATCAAC GCCCAAATAT TCCACGGCGA AGAAAGCGCA
TTCGCGAAGT GTGCCGAGGA GCTTGAGGAC GATTTACTTG ATAATTTGCC CACCGATGAA
CGCGATGTGG ACGCCGACGA GATCATCACA CGCATGACTC CGTATCCGCG CATCATTTCA
GCGCAACAGC CAGTTGCCGC GAGCGGAGGT TTGCGAGTCC GAATGCGACG TTCGACGCGC
CAGTAG
|
|---|
| Protein sequence | MASRVRARGA RQDEAQDAPS SSDAARGASG ASARASDDDG ATSVNAELET FIVARYLRRR
GRAFASVASD FERTARASGA FPRRLDVFGE AHDASFEDLA RGAFANVPED ALERAVARAR
GATHGRVDFR DEGGSGSVCA RAEGQKRLRG ALVRTLMRET AATGGCRVEA LAETKTVAKN
MNCLRTLRAH RDAAYCAVLS ASGRRLVTGG DDRLVKIWCA YNGLLRAACR GHVGEITYVA
IDSREEIVAS SSTDTSIRTW DLESGAPIAV LLGHTRSITE LHFCPSVPHV LLSTADDGTV
RLWSARRSSN DVKPMVIDLN VNGGAITGGR VVEHGVMPLA AMANEATSPG MRTRGAQLNA
IADEASAERD GEACQIVCGA FNDVGDTFAV GTSMCKVFMW KLDLEQLRSS GDCSPTENAV
KKISLSGSHL NDVVSVHFSH SGDMLLSASK DGQARIWVPS SSASLPGRAR LSWVLRSTLT
TPEDAAALRE QQRIGAITSQ QYSRRAPKVP NMHIAVWSTD DTRVIASMGD QSIRVWDVAS
GELRHAMREH TAATYVIQSN PLDPRLVMSA SYDGKAVIWD IVEGVALRVF DGSQYHTKLV
DGNWHPDGTS IICSDLSGQF SVFGTGDSVR LLRAKYEQFL QTEFVGDDAL GRSEGGHLIE
LATGALLHEA YPRNLLCDAM GDPYPDPYQS AFQSGQVAAC LPSADSGMPD VVVQAPTLAE
LAPTDVQGPW TAQDETMPMQ EIMYRMSDDE NDGVNEDNIS DADFEEPDDE DESDYDTDAE
RRARSARSRN RAVRSRRRRR ARRFDSDESE ESDDSEDRAT RRSAREHRKP QRLGVDAYES
TSDEEEDAPA RITRRRRREL EELGIDPDEV KSDDVSEEEE GKRPAKRVKK SVTSRHDIRL
LDAYSWLCAE EVIVGMYVPQ LGDELVYVAQ GHYERMQATG KNWRDEAPWQ TLTSMRFVEP
CTVSSLRYMI SDDGAYETRC LLELKLIDPA CGDYGKEFLV ELQKSDTPDF LVPISRYQTA
EQHSWKRGDY CAALWDDTGL GDMSPWYGMV HDAQSNEGKW TGSPWNTLCV QYLNVQNEDD
KFMNHSFWEL YNDEAMKKEH AKSFSDASTS RGPQKAKFAN VDENYPSLSA SVTKDLVARV
QRIIRNSRFA AFVEAIGPNE RFARADGAMT NYCSVVPAPM SLKLVMQRLK SAYYRQIGGF
RSDIELIRIN AQIFHGEESA FAKCAEELED DLLDNLPTDE RDVDADEIIT RMTPYPRIIS
AQQPVAASGG LRVRMRRSTR Q
|
|---|
| |