| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_29010 |
|---|
| Symbol | |
|---|
| ID | 4999469 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009355 |
|---|
| Strand | + |
|---|
| Start bp | 678712 |
|---|
| End bp | 681579 |
|---|
| Gene Length | 2868 bp |
|---|
| Protein Length | 955 aa |
|---|
| Translation table | |
|---|
| GC content | 55% |
|---|
| IMG OID | 640414890 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001415567 |
|---|
| Protein GI | 145340924 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00158423 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTGCACG CGAACGCGCG AGGGGCGATG CACGAGGCGG TCGTGCGCGC GGTGCACGGG
TTCAAGGGAG GGATGGCGGC GGCGGCGGCG GCGGGGCGAG ACGCGGCGGC GCGCGCGGCG
AAGGGGCTCG CGCGCGATGA GGACGTGATG AGCGTGAAAG AGGTCGTGGC TTACTTGAAT
ATGGTGATGT TTCCGAGGCA GAGCGAGGAG GATGTGTTTT GCGCGCGTCC GGGGTTTGTG
ATGATGTACG ATTTGACGCC GTTGAAGCGC GCGGCGCCGA CGACGAAGAA GCCGCCGGCG
AGCAAGTTTG AGGGAGATAA TGGTCGCGTG AAAGTTGATC GAGGGCCTTC GGCATCCGCG
AGTGGGGCGT CGACGGACGG TGGGGATCGG AGTGCGGCGC CGGCGCCGTC TGGGGCGGTG
ACGGCGCCGC GCGCCACGGC GACGAGCGGC GCCACGATTT CGCCGCACAT GGAAAAGCTC
GAGTTGGCGC TTCAGGAGAC GATGGATAGC GCTTTGCTCG CAGAAGAAGC GCAGTCAAAA
CTAGAAGCAC TGTTGGCGAA AGAACAGAAG TTACAGAGCG AGTTGGCCGC GACAAAGGTT
CCACAGGTAA AGCTCGACTT TTCTGACATG CCGAGCTTCG AACTGGACGC TGAGGCGAGG
GAATACAAGG GAGATCCCGA CGACAGACGA GAAATTTTAG CGCATAGGAA GCGAATTGAG
AAGGAAAGCG ACCGTTTGGC GGTCGCCAAA GAAAAATGGA TCGCGGGTAG AAGGAAGGAG
GCGAAGCAGG CGGCGAAAGT ACAAGCGAAT GCGACGAGGA ACGTGAAGCT GAGTGCTCTC
AGAGGAGAAA TCGCGCAGGC GAAAAAGGCA GTGCAGCAAA CATTTTCCGT GGCGACTTCT
CACGCGAAAA AGTTAGAGCG CCTTCGTTCG AGAGCAACTG CAGCACAGCA GCATGAAGCC
GAGCTGGCGA GCAGAAAGAG AGAAGCTGAA GCCTACCGTG CGCAGCAGCA GCAGGAACGA
GCGGCGAAAA AGTCAAAGAT TCAGCTCGAA CGCGAAGCTC AGAAGTTACA AGACGCCGAA
CGCAAACTCA AAGAGGCGGA GCAGCGAGCC AAAGTGAGAG CAGAGGCGGC TCGCTACCCT
ATGGATGATA ACGAGCTCGT CGCATACGAC GCGGCGCAAG CGAAAGAACA AAATCGCGAC
CCTTGGCCCG CCGTCGCGAA CGGGACGGCG TGGAAGCCAT CCGCGGTAGA TGTCTCGCAG
ATGCAAATTT GCGAATTCTT TAGCACATTT GGACGTATTC TAAAACCGAG CGTGGACGAA
TTCGGGGTAG AGTACCTGAA CACTATTCTG GATGATTCCG ACTTGACAAA ACTTTCGAAG
TTGTACGTAT CCTTGCTTCG AGTGGCCGTG ACGACGACGA CGTACGGAAT CGAGGCCCTC
GTGAAGACGT GGTCGGACGC TTTGGAGTTT AGTGGTACTT TCCCTGAAAT CATGAAGCAA
TTTGCCAAGG AAAAGAGCCG GGTTGGACAG ATCGATGCCG TTACGCTGAG TACGATTAAC
GCGCTCACAG AGAAGCGAAT AGGCATGTTC ACGCCTGAGG AGCACACGCG CGTGCTCGAT
TGGTTGTGTG GTGAATGTTT TGAGGCGCCG GAAGTCAACA AAGAAGTCAA TCGACGCGTA
AAGGCGCTTG AAGATTTGTC GAAGGAAAAA GAGAGTGATA AGGCGATCGA AAATGCATTC
GAGAAAGAGT ACAAGAAACT TGCGCCACAA TTACGCGATG CGAACGCGCT CGTCAAAAAT
GCATCCGACG AGCTCATCCA AAAAGTTCAG GCTCACGAAG CTTTGATAAC TCTACCGCAG
TCTGACGTCG AAGTGCCAAC CGAGTTGCAA TCTGATGTTC GCGCATTCCT TGAGGCGCGA
TCGCTTCTCA AAGAGACGGA GGCGAAAAAG AATGAAATAG CGGCCCAGGC TGCTAAACGT
CGTCGACAGT TTCAAGAAGA ACGCATTCGA TCGAATTGTT TGGGTCAAGA CCGCAACGGC
ACGAAGTATT ACTGGAATCT ATCGTATAGC TCGGGCGCAT TGCTTGCTAT CCATGTCGAT
GGTACCTGGT CAAAACTTAC TACAGAGCAG CAGCTACGTG AATGGAGCAA ATCCTTGAAC
ACAAAAGGTA TTCGTGAGCA TCGACTACAC AAGAACGTAG CTGAGATTCG CGCCGAACTC
GTCGCCGCGT TTAGGCAGGC TGAATTGGAA GCCATGAACG CCTTCCCAAA GTCGAGTCAG
CGAACGAAAG TTGAGAGATG GAACGAAATC GCTGCGCGAG AGACACTTTC GATGGAAGGT
GCGAAGAGGA TCATCCAACT GTTAATGGCT GATGTGGTAA ATTGCGAGGT ATCCGCGCCC
GACGGCACCA TGTCTGGATG GAGAATCTGG GGCAGAGAGT TGGAGAAAAC CACAGAGCTT
ACTGAGATGA TACGATACTT GATGCAAATC GAGGAGGCAA TGGTCGAAAT GTGCGATCTC
CCTAGAGACG TTACCGCGAA GGATGCGAAC GGTTCGGCGA TCAACGCATC GAACGAGCGT
CTCATGGCGA GCCACGAGTG GTGGGAGCTT ATCATTCCGT CGGATGAGAA GAAGGCGGGA
AAACGGCTGT GGCGCACAAA TCAAGAGCGC GCCATCTGGC AAGAGGCCAT GTCCACATCT
GACACGTATG CACGCATTGC TTACGGCGCC GCAATGCTGG AATCGTATTC TAGACCACTT
TTTGAATTTC TCGAGAACAT CAAGAAGAGA GCGAAACGCG AATCCAGTCG ATTCGCCGAT
TACACATCAT ACGACGATGG CTATGATTCT TACGGACAAC GCACGTAA
|
|---|
| Protein sequence | MVHANARGAM HEAVVRAVHG FKGGMAAAAA AGRDAAARAA KGLARDEDVM SVKEVVAYLN
MVMFPRQSEE DVFCARPGFV MMYDLTPLKR AAPTTKKPPA SKFEGDNGRV KVDRGPSASA
SGASTDGGDR SAAPAPSGAV TAPRATATSG ATISPHMEKL ELALQETMDS ALLAEEAQSK
LEALLAKEQK LQSELAATKV PQVKLDFSDM PSFELDAEAR EYKGDPDDRR EILAHRKRIE
KESDRLAVAK EKWIAGRRKE AKQAAKVQAN ATRNVKLSAL RGEIAQAKKA VQQTFSVATS
HAKKLERLRS RATAAQQHEA ELASRKREAE AYRAQQQQER AAKKSKIQLE REAQKLQDAE
RKLKEAEQRA KVRAEAARYP MDDNELVAYD AAQAKEQNRD PWPAVANGTA WKPSAVDVSQ
MQICEFFSTF GRILKPSVDE FGVEYLNTIL DDSDLTKLSK LYVSLLRVAV TTTTYGIEAL
VKTWSDALEF SGTFPEIMKQ FAKEKSRVGQ IDAVTLSTIN ALTEKRIGMF TPEEHTRVLD
WLCGECFEAP EVNKEVNRRV KALEDLSKEK ESDKAIENAF EKEYKKLAPQ LRDANALVKN
ASDELIQKVQ AHEALITLPQ SDVEVPTELQ SDVRAFLEAR SLLKETEAKK NEIAAQAAKR
RRQFQEERIR SNCLGQDRNG TKYYWNLSYS SGALLAIHVD GTWSKLTTEQ QLREWSKSLN
TKGIREHRLH KNVAEIRAEL VAAFRQAELE AMNAFPKSSQ RTKVERWNEI AARETLSMEG
AKRIIQLLMA DVVNCEVSAP DGTMSGWRIW GRELEKTTEL TEMIRYLMQI EEAMVEMCDL
PRDVTAKDAN GSAINASNER LMASHEWWEL IIPSDEKKAG KRLWRTNQER AIWQEAMSTS
DTYARIAYGA AMLESYSRPL FEFLENIKKR AKRESSRFAD YTSYDDGYDS YGQRT
|
|---|
| |