Gene OSTLU_28998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_28998 
Symbol 
ID4999500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009355 
Strand
Start bp659130 
End bp659981 
Gene Length852 bp 
Protein Length283 aa 
Translation table 
GC content62% 
IMG OID640414921 
Productpredicted protein 
Protein accessionXP_001415561 
Protein GI145340912 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.275972 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGCGC TCGTCACGGG CGCGACGGAT GGGATCGGCC TGCACACCGC GCGAAGGCTC 
GCGGCGAGCG GGCGCGACGT GCTCGTGCAC GGACGAGACC GCGAGCGCGT GCGAAGCGCC
GTCGAGGCCG TGCGGAAACA CGCGCGCTCG GAAAAACAAG TCATCGAAGG CTTGACGCGA
GACCTCTCGT CGTTGGAAGA CGTGCGCGCG CTCGCGCGCG ACGTCGTGGA CGGACGCGGG
GACGTGTCGA TGCTGTTCAA TAACGCGGGG GTGTACTCGA CGAAGGAGAC GCGGTGCGCG
AACGGGCACG AGATGACGTT CGCGGTGAAC GTGCTGGCGC CGTTCGCGCT GTGCGGGTTA
CTGTTACCGA CGCTCGCGGC GAACGCGCGG CGAACGGGGA CGAAGTCGAG CGTGTTGAAC
GTGGCGTCGA TTTCGGCGGC GCCGGCGATT GATTTTGACA ACTTGCGGTG CGAAAAGATG
TTTTCGCCCC ACGGGTCGTA CGCGCAGAGC AAGGCGTGCA TGAAGGCGTT CTCGTACGAG
CTGTACGATA GATTAGCGAG AGGAGCGCTA TCCGGGGCGA GCGTGGAAGA TTTAAACGTG
TTCTCGTGCG ATCCAGGGAC CGTGAACACG AAAATGCTGT TGGCGGGATG GGGTCGGTGC
GGTATCGAAA CGTACGAAGC GAACGATGAA TTTACAATCA TGGTGGACGA CATCGAAAGG
AACGGCGCGA AACACAACGG GGCGTACTTT GTTAACGCCG CACCGCAACC TCGTCGAAGC
GAGGCCGGTG ATGTAGACCA GGCGAAACTC TGGCGACTCC TCGAACAAGA AACGGGCGTC
GTCTACGCCT AA
 
Protein sequence
MTALVTGATD GIGLHTARRL AASGRDVLVH GRDRERVRSA VEAVRKHARS EKQVIEGLTR 
DLSSLEDVRA LARDVVDGRG DVSMLFNNAG VYSTKETRCA NGHEMTFAVN VLAPFALCGL
LLPTLAANAR RTGTKSSVLN VASISAAPAI DFDNLRCEKM FSPHGSYAQS KACMKAFSYE
LYDRLARGAL SGASVEDLNV FSCDPGTVNT KMLLAGWGRC GIETYEANDE FTIMVDDIER
NGAKHNGAYF VNAAPQPRRS EAGDVDQAKL WRLLEQETGV VYA