Gene OSTLU_28936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_28936 
Symbol 
ID4999777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009355 
Strand
Start bp552503 
End bp553015 
Gene Length513 bp 
Protein Length170 aa 
Translation table 
GC content62% 
IMG OID640415198 
Productpredicted protein 
Protein accessionXP_001415531 
Protein GI145340851 
COG category[K] Transcription 
COG ID[COG5624] Transcription initiation factor TFIID, subunit TAF12 (also component of histone acetyltransferase SAGA) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.00431202 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGAAAC GCGCGGCGGC GCAGGCGAGA CTCGCGGCGG CGCAAGCGGC GGCGGCGGCG 
TCCGCGGCGG CGGCGAAAAA GAAGACCGAT GATGGTGGTC ACGCGATCTC CAAGGATGAG
CTTCAGGAGC TGCTGAAGGA GTTCGCGCCG GGAGAGAGCT TCGAACCGGA GGTTGAGGAA
ATGCTGTTGG AGATTACGGA CGACTTCGTC GACAACGTGC TCGAACACGC GGCGCGATTA
GCGAGACATC GAGGAAGCGA GGCGGTGGAA CCGAAAGATG TGTTGTTACA TCTCGAGCGG
CAGTGGGATA TGCACATTCC CGGGTACGGT GGTGAAGAGG TGCCAAAGTA TACGGAGAAG
CAAAGCGTGG AGACGCACTC GAGACGACTG GCGGCGGTGC GACGGTCGGT AGCCGCGGCC
ACGGCGGCGC AAAACGAGCA ACGCAAGCAA GCTCGACTCG CAGCCGATCG TGCGACGAAA
GGAAAAGGAG ATATGGGCGC GGAAGACGCA TAG
 
Protein sequence
MEKRAAAQAR LAAAQAAAAA SAAAAKKKTD DGGHAISKDE LQELLKEFAP GESFEPEVEE 
MLLEITDDFV DNVLEHAARL ARHRGSEAVE PKDVLLHLER QWDMHIPGYG GEEVPKYTEK
QSVETHSRRL AAVRRSVAAA TAAQNEQRKQ ARLAADRATK GKGDMGAEDA