Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_28936 |
Symbol | |
ID | 4999777 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009355 |
Strand | + |
Start bp | 552503 |
End bp | 553015 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | |
GC content | 62% |
IMG OID | 640415198 |
Product | predicted protein |
Protein accession | XP_001415531 |
Protein GI | 145340851 |
COG category | [K] Transcription |
COG ID | [COG5624] Transcription initiation factor TFIID, subunit TAF12 (also component of histone acetyltransferase SAGA) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.00431202 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGAAAC GCGCGGCGGC GCAGGCGAGA CTCGCGGCGG CGCAAGCGGC GGCGGCGGCG TCCGCGGCGG CGGCGAAAAA GAAGACCGAT GATGGTGGTC ACGCGATCTC CAAGGATGAG CTTCAGGAGC TGCTGAAGGA GTTCGCGCCG GGAGAGAGCT TCGAACCGGA GGTTGAGGAA ATGCTGTTGG AGATTACGGA CGACTTCGTC GACAACGTGC TCGAACACGC GGCGCGATTA GCGAGACATC GAGGAAGCGA GGCGGTGGAA CCGAAAGATG TGTTGTTACA TCTCGAGCGG CAGTGGGATA TGCACATTCC CGGGTACGGT GGTGAAGAGG TGCCAAAGTA TACGGAGAAG CAAAGCGTGG AGACGCACTC GAGACGACTG GCGGCGGTGC GACGGTCGGT AGCCGCGGCC ACGGCGGCGC AAAACGAGCA ACGCAAGCAA GCTCGACTCG CAGCCGATCG TGCGACGAAA GGAAAAGGAG ATATGGGCGC GGAAGACGCA TAG
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Protein sequence | MEKRAAAQAR LAAAQAAAAA SAAAAKKKTD DGGHAISKDE LQELLKEFAP GESFEPEVEE MLLEITDDFV DNVLEHAARL ARHRGSEAVE PKDVLLHLER QWDMHIPGYG GEEVPKYTEK QSVETHSRRL AAVRRSVAAA TAAQNEQRKQ ARLAADRATK GKGDMGAEDA
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