| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_28831 |
|---|
| Symbol | |
|---|
| ID | 4999896 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009355 |
|---|
| Strand | + |
|---|
| Start bp | 374644 |
|---|
| End bp | 376608 |
|---|
| Gene Length | 1965 bp |
|---|
| Protein Length | 584 aa |
|---|
| Translation table | |
|---|
| GC content | 59% |
|---|
| IMG OID | 640415317 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001415474 |
|---|
| Protein GI | 145340734 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.00444962 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGCGA GCCGCGGGGA CATCAAGCCC GAGCTCGACG ACGATAATCC GTGCGTGCGA
CGACGCGAAC GCGACGACGC GCGCGAACCG ACGACGAAAG AGACGCCGCC GCCGCCGCTG
ACGACGGACG ACTGACGACG CGTTTCGACG GACGCAGCGT CGTCGAGACG ATCCCGGTGT
ACTTTAATCG CCCGCCGGAC GATGGCGGAG AGATGGTTCT GATTCAGGTG CGAAAACCGC
GCGGAAAGCG CGCGCGAGAC GCGCGCGAGG CGAGCGAGAG AGCGATCGAT GGGGACTGAC
GAGACGCCGC GACGGCGACG AGGAACGCAG TACCCGCTGC GACCGCCCGA TCGGCCGTAC
GACGTGGCGA ACGTGGAGAG CGTGCGATAT AAACCCGATG CGGCGAAACT AGAGATGACG
ATGCCGATCG AGGAGAGCGA AAGAAATCGA GACGAGGACG CGGCGGAGCA CACGCGAATT
TCTTCGCTGC TGTTGACGAG CTCGAGCGCG AAGGCGGAGG CGCACGGAGA CGGAGTGGTC
GTGGGCACGA TACATAACGG GGCTATGTAT TTGACGCCGA TCGAGGCGGT TTATCAGATG
CGACCGAGTT TACAGCATTT GGACGCGGCG GATAGCGCGA GGCAACCGCA CGACGCGGCG
CGAGAGGAGC GAGAGTTGCA AGAGGAGGAG GAACGCATGC TGCTGCCTCT TCAGGTGCAA
GTGCGACGAC GAGAGACGGC GAAACAGACG GAAATGCGAG TGCAGTCGCA CGCGTTTTTG
CGGCAGCGTG AGCACGAGGA GGCATGGATT CCGTTGCAGC CCTCCATGCC GGGAGATGCG
GATACAGAGT TCGTCAAGGC GTACGTGACG ACGACGCACG GCGAGTCGTG CGGACAGGCG
GTGACGGCGA GAGAATACCT CGACGTCATG TGCCCTGTGA GCGGAAGCAA ACGCGTCGCT
CCCGAGGACG AAAATGCCAA CACTTTGGGC GATGGAACTG GGTTGAGCAA GTCTCAGCTC
GCGTCTCTGC CGCTCGATAG ACGTATTCGA GCGTTGTTCG CCAAGGGTCA AAAGTCGTGC
ATGAAATTTA GCAGGATTCG TCAATTCGTG ACGGAACCCA TAGAGCCTGA ACAATTGATC
GCGGTGATTC AAGACAGCGC ACACTTGGTG CAAGGTAATT GGGTGGCCAA GTCCACGCTG
CGGTGCGGTG GGAACGTGAC CTGGGAAAAC ATGCGAGACT CGGCGCTCTT TCAGTTCGCG
CGTTCGCGCA ACGTCAAACC AGAGTTGGTA TCCAACTGTT TGAAGCGTAA CAGCACAAAA
TCGGATCCAA CGTTGGCAAA GATGCGTCGC GAAGTTCTCG CAGAATTCTC TCGTCCTCGA
GGTTACGGTA GCGCAGCAGA TGGTTTCGAG TTCAACGAAG CCACCGACGA GGCGTTCGAA
GCAGAATTCC CCGACGTCGT CTCGCGAGAG ATGGAATCGT GGCTCGCCTT GGCGCCATCC
CTCGACATCA CGTTGCTCAC CAACGAATTG ACGACGCCGA GCGTACCGCC ACACGTCTCA
CAAATTCGCC TCACCACCGT TCGCTCGCTC GTGTACGCGA AGTTTGAGAA GAGGACCCAC
CTGAGCTTGG CGGACATTCG CGCGTTTTTG CTGACGCAAG CCCCCGACGT CGCGGCGTGC
GCATACTTTC GACAAGCCGA ACTTCTGGGG ATGTTCGACG GTGATATCGC GTGCATCGAG
GGTATTTGCG TTCTGGTATC CGTGAACGAC CCCGCGATCG ACCCTCTTCG CAGGAAAATC
TTAGGTTTGC TCTACAAGCA GAGCGGCGTT GTCAAGCGTT CCGAAATCAT GGACGCCCTC
GGCGACGGCG CGCCCAGTCA GCACACCTAC ACCAAAGTCC TCTCAGACTT GTGCTCATCG
AAAGGAAGCA TTTGGACCAT TAAGGCGGCG GAGGAGATGA GGTAA
|
|---|
| Protein sequence | MRASRGDIKP ELDDDNPVVE TIPVYFNRPP DDGGEMVLIQ YPLRPPDRPY DVANVESVRY
KPDAAKLEMT MPIEESERNR DEDAAEHTRI SSLLLTSSSA KAEAHGDGVV VGTIHNGAMY
LTPIEAVYQM RPSLQHLDAA DSARQPHDAA REERELQEEE ERMLLPLQVQ VRRRETAKQT
EMRVQSHAFL RQREHEEAWI PLQPSMPGDA DTEFVKAYVT TTHGESCGQA VTAREYLDVM
CPVSGSKRVA PEDENANTLG DGTGLSKSQL ASLPLDRRIR ALFAKGQKSC MKFSRIRQFV
TEPIEPEQLI AVIQDSAHLV QGNWVAKSTL RCGGNVTWEN MRDSALFQFA RSRNVKPELV
SNCLKRNSTK SDPTLAKMRR EVLAEFSRPR GYGSAADGFE FNEATDEAFE AEFPDVVSRE
MESWLALAPS LDITLLTNEL TTPSVPPHVS QIRLTTVRSL VYAKFEKRTH LSLADIRAFL
LTQAPDVAAC AYFRQAELLG MFDGDIACIE GICVLVSVND PAIDPLRRKI LGLLYKQSGV
VKRSEIMDAL GDGAPSQHTY TKVLSDLCSS KGSIWTIKAA EEMR
|
|---|
| |