Gene OSTLU_28827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_28827 
Symbol 
ID4999624 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009355 
Strand
Start bp368648 
End bp370640 
Gene Length1993 bp 
Protein Length444 aa 
Translation table 
GC content59% 
IMG OID640415045 
Productpredicted protein 
Protein accessionXP_001415471 
Protein GI145340727 
COG category[Z] Cytoskeleton 
COG ID[COG5023] Tubulin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CGACCTCGCG ACGCCGCGCG AGCGCCGAAC GCGCGCCTCT CGTCGTAGAC ATGCGGTGCG 
TCGACTTTTT CTTCATTCAA TCGCGTCGAC GCGCGCGCGT CGACGCGCGC GCGCGCGCGT
CGAAACCGCG ATCCCGCGCC CGCGACGTTT GAAGTTGGAT CGCTCGCTGA CGAATGTGCG
CGTAATCTTT CCCTCGTGAA CAGCGAAATC GTCCACATCC AGGGCGGCCA GTGCGGTAAC
CAGATCGGGG CGAAGTTCTG GGAGGTACGT CACGCCTCGC GCGCGCGCTT CGACCGTCGC
GAGCGCGAAT GCGAGGGCGA TTTCACGTCA TCTGTCGCGA CCGCGAGATC GACGACTGAC
GCGAACGATC GACGACGACG ACGGCGCGCG ATAGGTTATC TGCGACGAGC ACGGGATCGG
GGCCGATGGG ACGTATATCG GTGATTCTGA TTTGCAGCTC GAGCGCGTGA ACGTGTACTA
CAACGAAGCG AACGGAGGTA CGTGATGCGC TCGATCGGGC GCGGGCGCTA ACGGCTATAT
GTCACTGGAG CGGGACGCGA GAGACGCGCG CGCGAAGCGC GAGCGGTGGG GTGAGAGGAA
AACGAACGAA CAGAGAGACT GACGAGATGT GCGATGACGC GATGCGATGA TGTAGGACGC
TACGTGCCGC GCGCCGTGCT CATGGATCTC GAGCCGGGGA CGATGGATTC CGTGCGCTCG
GGACCGTACG GACAAATCTT CCGACCGGAC AACTTTGTGT TCGGACAGAC TGGTGCGGGG
AATAACTGGG CCAAGGGTCA CTACACCGAA GGTGCGGAGT TGATCGATTC CGTGATGGAC
GTGGTGCGAA AAGAGGCTGA ATCATGCGAC TGCTTGCAAG GTTTCCAAGT GGCGCACTCG
CTCGGAGGCG GTACCGGTTC CGGTATGGGG ACGCTTCTCA TCTCGAAGAT TCGCGAAGAG
TACCCCGATC GCATGATGCT CACGTTCTCT GTCGTACCGT CGCCCAAGGT GTCCGACACC
GTGGTCGAGC CGTACAACGC CACGCTTTCC GTGCACCAGC TCGTCGAAAA CGCCGACGAG
TGCGTCGTGC TCGACAACGA AGCGCTTTAC GACATCTGCT TCCGCACGCT GAAACTCACG
AACCCGACGT TTGGTGACTT GAACCACTTG ATTTCGGCGG TTATGTCCGG TATCACTTGC
TGCTTGCGAT TCCCGGGTCA GCTCAACGCT GATTTGCGTA AACTCGCGGT GAACTTGGTG
CCGTTCCCGC GCTTGCACTT CTTCATGGTT GGTTTCGCGC CGCTCACGTC CAGAGGCGCG
CAACAGTACC GCGCGCTTTC TGTGCCGGAA ATCACCGCGC AAATGTGGGA CGCCAAAAAC
ATGATGTGCG CCGCCGATCC GCGTCACGGC CGCTACCTCA CCGCCTCTGC GCTTTACCGC
GGTCGCATGT CAACCAAGGA AGTTGACGAA CAACTCTTGA ATGTTCAAAA CAAAAATTCG
GCGTACTTCG TGGAGTGGAT TCCTAACAAC GTGAAGAGCT CGGTGTGCGA CATCCCTCCC
AAGGGTCTTA AGATGTCCGC CACCTTTGTC GGTAACACTA CCGCGATTCA AGAGATGTTC
AAGCGCGTCA GCGAAGCGTT CACGTCGATG TTCCGTCGCA AGGCTTTCTT GCACTGGTAC
ACGGGTGAGG GTATGGACGA GATGGAGTTC ACTGAGGCTG AATCTAACAT GAACGATTTG
GTGTCCGAGT ACCAGCAGTA CCAAGACGCC ACTGTGGACG ATGATGGTGA TTACGACGAA
GACGAGGACG GGGCATATTA AATAAGGCGA TCAAATGAGG CGGTTTTCTC TCGCGCGTCT
CGGCGGCGCG TCTCTCGACG CGACCAACCA ACCGACGGCG CGCGTTTCGT CTCGCCGCCT
CTGCCTCGCG TTTCGGCGCA TTCTAGACAC CCACGGTTAG CGTAGGACAC AATCGATGCC
TTTTCGAGCA ACA
 
Protein sequence
MREIVHIQGG QCGNQIGAKF WEVICDEHGI GADGTYIGDS DLQLERVNVY YNEANGGRYV 
PRAVLMDLEP GTMDSVRSGP YGQIFRPDNF VFGQTGAGNN WAKGHYTEGA ELIDSVMDVV
RKEAESCDCL QGFQVAHSLG GGTGSGMGTL LISKIREEYP DRMMLTFSVV PSPKVSDTVV
EPYNATLSVH QLVENADECV VLDNEALYDI CFRTLKLTNP TFGDLNHLIS AVMSGITCCL
RFPGQLNADL RKLAVNLVPF PRLHFFMVGF APLTSRGAQQ YRALSVPEIT AQMWDAKNMM
CAADPRHGRY LTASALYRGR MSTKEVDEQL LNVQNKNSAY FVEWIPNNVK SSVCDIPPKG
LKMSATFVGN TTAIQEMFKR VSEAFTSMFR RKAFLHWYTG EGMDEMEFTE AESNMNDLVS
EYQQYQDATV DDDGDYDEDE DGAY