Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_28620 |
Symbol | |
ID | 4999427 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009355 |
Strand | + |
Start bp | 21388 |
End bp | 23320 |
Gene Length | 1933 bp |
Protein Length | 549 aa |
Translation table | |
GC content | 55% |
IMG OID | 640414848 |
Product | predicted protein |
Protein accession | XP_001415365 |
Protein GI | 145340508 |
COG category | [C] Energy production and conversion |
COG ID | [COG0281] Malic enzyme |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CGAGCGCGCG AACGGTGTCT GCTCGTACGC ACCTCGCGCG GCGGCGACGA GTACCATACG AAACAAAAAA ACAGACACCC CACTGGTTTC GTACGCCTGG ACGCGCCGTA CATCCGTTCA AACGCGTGCT CTCGTCGTCA ACGGCATCTA ACGATTGCGC CCGACCGAAT CGACGTTTCA TCAGGATTCT GCGCGAGGCG AGTAAGGGAG CGATGGACAA TATAGATAAC GTGCGCGGTA CGGCGGTGTT GGACTCACCG TCACTGAATA AAGGCACGGG ATTCACATTT ACGCAGCGTG AGCGTCTGGG CTTGCGCGGT TTGCTTCCGC GCAAGTACGA AACCGTCGAG ATTCAGGTGA AACGCGCGTG GACGCAGTTG TGCGCGTTCG AGGAAGATAT GAACAGGTAT ATCTTTCTCG AAAATTTGCA CATGCAGAAC GAGCGGTTGT TCTATCGCGT ACTCGTGGAA CATCTCGAAG ACTTGATGCC GATCGTGTAC ACGCCCACCG TCGGCGAGGC GTGCATCAAC TTTGACGCAC TCTACCGTAA TCGCTGCGGA ATGTATTTTA GTCGGTTAGA TTCCGGCGTG ATGCGACGGA TGCTTGATAA TTGGCCTTCT CCCGAGACCG AAATCATCGT CGTCACGGAT GGAGGCCGAG TGCTCGGTCT CGGCGATTTG GGCACAAATG GGATGGCCAT CTCGGTTGGA AAAGTGAGTC TCTACGTTGC GAGTGGAGGC TTCGATCCGG CGAAGTCGAT GCCGGTTTGC TTGGATTTGG GCACAAGCAA CGTCGCTCTG CGCGCGCACG ACTTCTATCT GGGTGCGGAT GAACCCCGCC TTACGGGTGA CGCGCATCTC GCCGTGGTGA CAGAATTTTG TCTCGCCGTA AAAGATAAAT GGCCGAATTG TCTGATTCAG TTTGAGGATT TCAAAACTGA AGACGCGTTT AGGATTCTCG ATCACATGCG CCATAAGGTT TTATGCTTCA ATGACGACAT ACAAGGAACC GGGGCGACCA TTTTAGCAGG CCTCATCAAC GCGCTTCGAG CGCAAGGAAC GCCGACAAAA GACGCGCGAA TAATATTTTT CGGCGCGGGT TCGTCGGCCA TCGGAGTGTC GACGCAGATC ATACAGCTAC TGATGAGCGA GGGGTTGAGC GAGGAGGACG CGCGGCAGTC GATTTATCTA ATGGACTCTA AAGGTTTAAT CACTGACCAA CGCGAGGATT TCGCAGGACT CTCGGATCAA AAGAAGCAGT TCGCGCAAGT CGGTGTCGAA CCTTGCGACG ACTTGGGCGC TCTGATTCAA CGCGTAAAGC CGCATGCATT GTTTGGGTTG TCTGGTTTTG GTCCTGTGTT TACGCGGGAA CACATCGAAA TGCTGTGCGA CCACATCGGC AAGCCCATCG TGTTTCCGCT CTCCAACCCG ACAAGTAAGG CGGAAATCAC CGCGCTTGAC GCGTACACTT GGTCCAAGGG AAAGTGCTTA TTTGCTGCGG GATCGCCGTT CGATCCAGTC GTGATCGATG GTAAGACGTA CACGCCTGGT CAAGGGAACA ATATGTTCAT CTTTCCCGGC GTCGGCTTCG CCGCCGTGAG CATTCAAGCA GAATACGTTC CGGATTCCTT CTTTCTTTGT GCCGCGCGCG CGCTCGCCGC TATTGTCCCC GATGAGGACG TTCGCTCTGG CACCATTTAT CCTTCTGTTT CTATAATCCG TGACATCTCT CGTCAAGTCG CCGTGGCCGT GGCGAATCAC GCGTACGACG TCGGCGTGGC CAAGCTCTAT CCGCGACCGG GCGACATGAA CGCATTCATC GCCGAGCGCA TGTACTTCCC CATGAACGAC GGCGCGGTCT GAGCGTGTCA ACATCGCGTG ATTTCTGACG CCGCGATCGC GCGCCGTTGC GAAAGCAGCC CGTTCTCTTG TAA
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Protein sequence | MDNIDNVRGT AVLDSPSLNK GTGFTFTQRE RLGLRGLLPR KYETVEIQVK RAWTQLCAFE EDMNRYIFLE NLHMQNERLF YRVLVEHLED LMPIVYTPTV GEACINFDAL YRNRCGMYFS RLDSGVMRRM LDNWPSPETE IIVVTDGGRV LGLGDLGTNG MAISVGKVSL YVASGGFDPA KSMPVCLDLG TSNVALRAHD FYLGADEPRL TGDAHLAVVT EFCLAVKDKW PNCLIQFEDF KTEDAFRILD HMRHKVLCFN DDIQGTGATI LAGLINALRA QGTPTKDARI IFFGAGSSAI GVSTQIIQLL MSEGLSEEDA RQSIYLMDSK GLITDQREDF AGLSDQKKQF AQVGVEPCDD LGALIQRVKP HALFGLSGFG PVFTREHIEM LCDHIGKPIV FPLSNPTSKA EITALDAYTW SKGKCLFAAG SPFDPVVIDG KTYTPGQGNN MFIFPGVGFA AVSIQAEYVP DSFFLCAARA LAAIVPDEDV RSGTIYPSVS IIRDISRQVA VAVANHAYDV GVAKLYPRPG DMNAFIAERM YFPMNDGAV
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