Gene OSTLU_28620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_28620 
Symbol 
ID4999427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009355 
Strand
Start bp21388 
End bp23320 
Gene Length1933 bp 
Protein Length549 aa 
Translation table 
GC content55% 
IMG OID640414848 
Productpredicted protein 
Protein accessionXP_001415365 
Protein GI145340508 
COG category[C] Energy production and conversion 
COG ID[COG0281] Malic enzyme 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CGAGCGCGCG AACGGTGTCT GCTCGTACGC ACCTCGCGCG GCGGCGACGA GTACCATACG 
AAACAAAAAA ACAGACACCC CACTGGTTTC GTACGCCTGG ACGCGCCGTA CATCCGTTCA
AACGCGTGCT CTCGTCGTCA ACGGCATCTA ACGATTGCGC CCGACCGAAT CGACGTTTCA
TCAGGATTCT GCGCGAGGCG AGTAAGGGAG CGATGGACAA TATAGATAAC GTGCGCGGTA
CGGCGGTGTT GGACTCACCG TCACTGAATA AAGGCACGGG ATTCACATTT ACGCAGCGTG
AGCGTCTGGG CTTGCGCGGT TTGCTTCCGC GCAAGTACGA AACCGTCGAG ATTCAGGTGA
AACGCGCGTG GACGCAGTTG TGCGCGTTCG AGGAAGATAT GAACAGGTAT ATCTTTCTCG
AAAATTTGCA CATGCAGAAC GAGCGGTTGT TCTATCGCGT ACTCGTGGAA CATCTCGAAG
ACTTGATGCC GATCGTGTAC ACGCCCACCG TCGGCGAGGC GTGCATCAAC TTTGACGCAC
TCTACCGTAA TCGCTGCGGA ATGTATTTTA GTCGGTTAGA TTCCGGCGTG ATGCGACGGA
TGCTTGATAA TTGGCCTTCT CCCGAGACCG AAATCATCGT CGTCACGGAT GGAGGCCGAG
TGCTCGGTCT CGGCGATTTG GGCACAAATG GGATGGCCAT CTCGGTTGGA AAAGTGAGTC
TCTACGTTGC GAGTGGAGGC TTCGATCCGG CGAAGTCGAT GCCGGTTTGC TTGGATTTGG
GCACAAGCAA CGTCGCTCTG CGCGCGCACG ACTTCTATCT GGGTGCGGAT GAACCCCGCC
TTACGGGTGA CGCGCATCTC GCCGTGGTGA CAGAATTTTG TCTCGCCGTA AAAGATAAAT
GGCCGAATTG TCTGATTCAG TTTGAGGATT TCAAAACTGA AGACGCGTTT AGGATTCTCG
ATCACATGCG CCATAAGGTT TTATGCTTCA ATGACGACAT ACAAGGAACC GGGGCGACCA
TTTTAGCAGG CCTCATCAAC GCGCTTCGAG CGCAAGGAAC GCCGACAAAA GACGCGCGAA
TAATATTTTT CGGCGCGGGT TCGTCGGCCA TCGGAGTGTC GACGCAGATC ATACAGCTAC
TGATGAGCGA GGGGTTGAGC GAGGAGGACG CGCGGCAGTC GATTTATCTA ATGGACTCTA
AAGGTTTAAT CACTGACCAA CGCGAGGATT TCGCAGGACT CTCGGATCAA AAGAAGCAGT
TCGCGCAAGT CGGTGTCGAA CCTTGCGACG ACTTGGGCGC TCTGATTCAA CGCGTAAAGC
CGCATGCATT GTTTGGGTTG TCTGGTTTTG GTCCTGTGTT TACGCGGGAA CACATCGAAA
TGCTGTGCGA CCACATCGGC AAGCCCATCG TGTTTCCGCT CTCCAACCCG ACAAGTAAGG
CGGAAATCAC CGCGCTTGAC GCGTACACTT GGTCCAAGGG AAAGTGCTTA TTTGCTGCGG
GATCGCCGTT CGATCCAGTC GTGATCGATG GTAAGACGTA CACGCCTGGT CAAGGGAACA
ATATGTTCAT CTTTCCCGGC GTCGGCTTCG CCGCCGTGAG CATTCAAGCA GAATACGTTC
CGGATTCCTT CTTTCTTTGT GCCGCGCGCG CGCTCGCCGC TATTGTCCCC GATGAGGACG
TTCGCTCTGG CACCATTTAT CCTTCTGTTT CTATAATCCG TGACATCTCT CGTCAAGTCG
CCGTGGCCGT GGCGAATCAC GCGTACGACG TCGGCGTGGC CAAGCTCTAT CCGCGACCGG
GCGACATGAA CGCATTCATC GCCGAGCGCA TGTACTTCCC CATGAACGAC GGCGCGGTCT
GAGCGTGTCA ACATCGCGTG ATTTCTGACG CCGCGATCGC GCGCCGTTGC GAAAGCAGCC
CGTTCTCTTG TAA
 
Protein sequence
MDNIDNVRGT AVLDSPSLNK GTGFTFTQRE RLGLRGLLPR KYETVEIQVK RAWTQLCAFE 
EDMNRYIFLE NLHMQNERLF YRVLVEHLED LMPIVYTPTV GEACINFDAL YRNRCGMYFS
RLDSGVMRRM LDNWPSPETE IIVVTDGGRV LGLGDLGTNG MAISVGKVSL YVASGGFDPA
KSMPVCLDLG TSNVALRAHD FYLGADEPRL TGDAHLAVVT EFCLAVKDKW PNCLIQFEDF
KTEDAFRILD HMRHKVLCFN DDIQGTGATI LAGLINALRA QGTPTKDARI IFFGAGSSAI
GVSTQIIQLL MSEGLSEEDA RQSIYLMDSK GLITDQREDF AGLSDQKKQF AQVGVEPCDD
LGALIQRVKP HALFGLSGFG PVFTREHIEM LCDHIGKPIV FPLSNPTSKA EITALDAYTW
SKGKCLFAAG SPFDPVVIDG KTYTPGQGNN MFIFPGVGFA AVSIQAEYVP DSFFLCAARA
LAAIVPDEDV RSGTIYPSVS IIRDISRQVA VAVANHAYDV GVAKLYPRPG DMNAFIAERM
YFPMNDGAV