| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_1868 |
|---|
| Symbol | |
|---|
| ID | 5000025 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009355 |
|---|
| Strand | - |
|---|
| Start bp | 1026682 |
|---|
| End bp | 1028565 |
|---|
| Gene Length | 1884 bp |
|---|
| Protein Length | 565 aa |
|---|
| Translation table | |
|---|
| GC content | 58% |
|---|
| IMG OID | 640415446 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001416008 |
|---|
| Protein GI | 145341834 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG5163] Protein required for biogenesis of the 60S ribosomal subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0330332 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CGGTCCGCGT CGTCGCGATA CGTGACGCGG AATCAAGCGC TGCATCGACT GCAGCTCAAG
CTCGGGGACT TTCGAAGGCT GTGCATACTG AAGGGGATTC ACCCGCGCGA GCCGCGAAGG
AAGCACCAGG GGCAGGGGAA GACGTATTAT CACGTCAAGG ACATCGCGTT CTTGCATCAC
GAGCCGCTGT TGGAGAAGTT TCGGGAGTTG AGGGCGTACG CGAGAAAGCT GAAGCGGGCC
AAGGCGAAAC AAAATTACGT AGCGCTCGAT CGGTTGAGGG ATAACACGCC GCGGTATGAG
CTGAGTCATT TGGTGCTGGA GCGGTATCCG ACGTTTCAGG ACGCGCTGGG GGATCTGGAT
GACCCGATGG CGATGTGCGC GCTGTTCGCG GTGCTGCCGA CGGTGAATCG GCACGACATC
GCGCCCGAAA TCGTGGAGAA GTCGGAGCGT TTGAGTCGAG AGTTTAAGTC GTTTTGCGTG
CGAACGCACG CTTTGCGAAA GGTTTTTATT TCTGTCAAGG GGATTTACTA CGAGGCGGAG
ATTCAAGGAG AAAAGATCAC GTGGCTCGAG CCGCACGCGT TGGCGCAAAC CATGCCCGAG
GACGTGGACT ACCGCGTCAT GCTCACGTTT CTCGAGTTTT ACCACGACTT GATGTCGTTC
GTGAACTTTA AGCTGTACAA AGACGCTGGA TTGCAATATC CACCGACTTT GAACGAGGAG
ATGGACGACG CCGCGGCGGG TCTGGCTGCC GTCGTGCACA AGCTCGCGAA GCAAGCCGAC
GCGGCGAACG CGCGCGCGCT GCCGGCGAAT AGCGAAGCGG CGCGCGCCGT AGAATCGCGT
GCGCAATCCC TCAAGGAAAA GCTCGCGTTG ATCGCCGAAC ATCAAGACGA AGAAGAAGAC
GACGACGAAG ACGCGCACAT GGCGAACGAT GACGACGAAG ATGGCGGAGA CGAAGAGATG
ACACCCGAGC AACGCGAGTG CGCGCGACTC TTCGACGGTC TCGTCTTCTT TATCAATCGC
GAGGTTCCGC GTAACATGAT GGTCTTCATC ATCAAATCTT TCGGTGGCGA GGTGTGCTGG
GATGGCGACG GTTCCCCGTA CGACGCCGAT GACTCGCGCA TCACGCACGT CGTCATAGAT
CGCCCGACGA AGAACATGAA GCTGAATCCC AAAGTCGTGT ACGTGCAGCC GCAATGGGTG
TGCGATTGCG CCAACTGGCG CGTGCTCATT CCGCCCAAAG ACTACGCTCC CGAATGCGAG
CCACCGCCTC ACTTGAGTCC ATTCGTCGGC GCCGATGACG ATGGGTACAC GCCCGAGTAC
GCCAAGACGC TGTTGAAGCT CCAAGAAGAG ACGCGCGCCA TTAAAAACGG CGTGCCGATG
ATCAAGGTGC TCGACGACGC GGACGCGGAA ATGGACGAAG AAGCGGAGGC CGCGGCGGAA
GAGAAGCGTT ACAGAAAAGA ACTAGAAGCG GAAATAAAGG GGGTTTCGTA CTCAAAGTCT
TTGGAGAAGA AGGACGAGGA CGAGGACGAG GACGAGGACG AGTCGGACGA CGACGCCTCG
GACGACGACG CCTCCGAAGA CGAGGACGCC TCGGACGAGT CGTCATCAGA GGACGAGAAC
GGCGACCCGA AGAGTCGCCT CACGTTCGAC ATGGCGCTGA GCGAAAAGGA CAAAATCATG
CGCGATCAGC TCGCCAAGGG TTCGGACGAG GAACAGATGA AGAAGATGTC GTACATGCTC
TTGCCTCGCA AAAAGAGAGA GCTGTACAAA GCCATGCAAA TCGGTATCGC GAAGAAGGAG
AAACGCGCGG CCGAGCTCAC GAGATTGGCT AACGAGCACA AAGAGAAGAA ACGCGCCGCC
GCGGAGGGCG AAAAAGAAGA ACCG
|
|---|
| Protein sequence | RSASSRYVTR NQALHRLQLK LGDFRRLCIL KGIHPREPRR KHQGQGKTYY HVKDIAFLHH
EPLLEKFREL RAYARKLKRA KAKQNYVALD RLRDNTPRYE LSHLVLERYP TFQDALGDLD
DPMAMCALFA VLPTVNRHDI APEIVEKSER LSREFKSFCV RTHALRKVFI SVKGIYYEAE
IQGEKITWLE PHALAQTMPE DVDYRVMLTF LEFYHDLMSF VNFKLYKDAG LQYPPTLNEE
MDDAAAGLAA VVHKLAKQAD AANARALPAN SEAARAVESH EEEDDDEDAH MANDDDEDGG
DEEMTPEQRE CARLFDGLVF FINREVPRNM MVFIIKSFGG EVCWDGDGSP YDADDSRITH
VVIDRPTKNM KLNPKVVYVQ PQWVCDCANW RVLIPPKDYA PECEPPPHLS PFVGADDDGY
TPEYAKTLLK LQEETRAIKN GDEDEDEDED ESDDDASDDD ASEDEDASDE SSSEDENGDP
KSRLTFDMAL SEKDKIMRDQ LAKGSDEEQM KKMSYMLLPR KKRELYKAMQ IGIAKKEKRA
AELTRLANEH KEKKRAAAEG EKEEP
|
|---|
| |