Gene OSTLU_13679 details

Gene Information

• Locus tag: OSTLU_13679
• ID: 4999972
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ostreococcus lucimarinus CCE9901
• Kingdom: Eukaryota
• Replicon accession: NC_009355
• Strand: +
• Start bp: 311848
• End bp: 312525
• Gene Length: 678 bp
• Protein Length: 225 aa
• GC content: 61%
• IMG OID: 640415393
• Product: predicted protein
• Protein accession: XP_001415451
• Protein GI: 145340686
• COG category: [R] General function prediction only
• COG ID: [COG0724] RNA-binding proteins (RRM domain)

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 0.249482
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGGAGT TCGAGGGACG GCACATTCGC GTTGATTTAG CGAGTAAACC ATCGATCATA 
CGAAGTGAGG TGGTGTATGA TCACACGCGA AGTGTCTTCT TGGGCCATTT ACCGTTTAAT 
GTCGACGATG AGGACGTGAT TCGGTTGTTC AACAAGAATA AAGAGTATCC CGATTTGCGC 
AAGAGCGTCG AGGCCGTGCG CGTGGTGCGA GACAGAAAGA CGACCATGGG TAAGGGCATC 
GGGTTCGTGT TGTTCAAAAC GCCAGCGCAA GCGCGTACGG CGCTTTTGCT TGACGGGAGT 
AAGCTCGGCG ATAGAGAGAT TCGCGTGAGC AAAGCCGCTC GATCCAAGGC GCCGAAACCC 
GGCACGCCGA GCAAGGCGCG CGCCGAGCCG AAGGTCGCCA CCGGTGCCGA ACGACGGAAT 
CCGAAGCTTC GTGACGAAGG TGGCGATGCG TCGACGTCGC GTGGCACAAA CGCGTGGGAA 
GGGTCGAGAT CTCGTCCCGG TGGAAAATCG TCCAAGAGCG CGCACCGCGG CGGCGAGGCG 
CAGCGCGGCG CCCCAGGCGC GAGGCAAACT TCGAGTAAAG CCGGCATCGC GAAGGCGGCC 
AAACGATCGG GAAAGCGCCC CGCCGTGGCG GCGCGCAAGG CCAAAGCCAA GGCGTCCGCG 
GCGGCGGGAC GTAACTAA 

 

Protein sequence

MKEFEGRHIR VDLASKPSII RSEVVYDHTR SVFLGHLPFN VDDEDVIRLF NKNKEYPDLR 
KSVEAVRVVR DRKTTMGKGI GFVLFKTPAQ ARTALLLDGS KLGDREIRVS KAARSKAPKP 
GTPSKARAEP KVATGAERRN PKLRDEGGDA STSRGTNAWE GSRSRPGGKS SKSAHRGGEA 
QRGAPGARQT SSKAGIAKAA KRSGKRPAVA ARKAKAKASA AAGRN