Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_13673 |
Symbol | |
ID | 4999792 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009355 |
Strand | + |
Start bp | 297186 |
End bp | 301111 |
Gene Length | 3926 bp |
Protein Length | 1174 aa |
Translation table | |
GC content | 55% |
IMG OID | 640415213 |
Product | predicted protein |
Protein accession | XP_001415447 |
Protein GI | 145340678 |
COG category | [K] Transcription |
COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.320085 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGCGTCG ACTCCAGAGA AGACGACGAG GAAGAAGAGA TCGGACAGGT GCGTTTGAAC GCCCGCGCGC GACGCGCGAG CGCGCGAAGG CGACGCGAAG GCGCCGAGAT CACCGAACGA CGCCCGCGAT CGACGCCGCA TTCGTCGCGA ATGCGTCGTC TTTCGCGACG CTCGCGCGGA TTCGAGCGCG CGCGGACGGT CGCGTGGACG CGACGTCGCA TCCGTGGTCG CGCGCGGTGA CGAAACGCGC GCGGAGGAGG CGCGCGAGGA CGAAGATCGC GGAAAAAGAT CAGAGACTGA CCGAATCTCA CTCGTTTTCG GAGCGCGCAG GAAGACGCGT GGGTCGTCAT CAGTTCCTTC TTCGAGGAGA AGGGTTTGGT GCGCCAACAA CTCGACTCTT TCAATGAGTT CATCCAGCAC ACGATGCAAG AGATTGTCGG TGCGTGCGAT CGAGCGAGAC GCACGACGCG ACGCGCGGGT AAAACGCGGG GTTTAGGGTA ACGTATAAGA TCGCGGAAAC GAGAGACTGA CGTGCTTTGG ATTCGTTCGA CGACGCAGAT GAGATGCGGG AGATTGAGTT GACGCCAGAA CATCAACACA TGCCCGGACA GGATATCGAT TCGATGGAGA AGAAGACGTA CAAGATTAGC TTTAACCAGA TTTACCTCAG CAAGCCGATG GTGACCGAGG CGGATGGATA CACCACAACG CTGTTCCCAA AGGAAGCGAG ATTGCGTAAT CTCACGTATT CGGCGCCGTT GTACGTCGAT ATGGTGAAGG AAGTCACGAC GGTGCAACCG GACGGGGAAA CGACGGTGGA GAAGGAGATT TTGAACAAAA ACTTCATCGG CAAGGTTCCG ATTATGCTGC GCTCTGATTA CTGTTCGCTT CACGGACACA CGGACAAGGA GTTGACCGAG CTCGGGGAGT GCCCGTACGA TGAGGGTGGT TATTTCGTCA TCAACGGTAG CGAGAAGGTG CTCATCGCGC AGGAGCGTAT GAGTACAAAC CACGTGTACG TGTTCGAGAA GAAGCAACCG AGCAAGTTTA TGTGGCAGGC TGAGTGCCGC AGTCAACCGG AGCGCGGGTC TCGCGGCGCG AGCTCGTGCG TGATGCGACA ACTTCACGCC CCGGGGACTA AGGACGCGCC TGGTCCGATT CGATGTACGC TACCGTACAT TCGAACGGAT ATTCCCATCT TCGTCGTGTT CCGCGCTCTC GGCTTCGTCG CAGACAAGGA TATCTTGGAG CACATCGTGT ACGATCTCGC GGACAATGAA ATGATGGAGA TGTTGAGGCC GTCTATCGAA GAGGCTTTCG TGATCCAATC GCAAGAAGTG GCGCTCGATT TCATCGGTAA GCGTGGATCC GCCGTCGGCG TTTCTCGCGA GAAGCGGATC AAGTACGCAA AGGAGATTTT GCAAAAAGAG CTACTTCCCC ACGTCGGCGT GCGTGAGGAT TGCGAAACGA AGAAGGCGTA CTTTTTGGGT TACATGATTC ACCGTTTGTT GCTGTGCTCT CTCGGACGCC GTCCGGAAGA CGATCGTGAT CACTACGGCA ATAAGCGTTT GGATCTCGGC GGTCCGTTGT TGGCACAATT GTTCCGACAA TTGTTCCGCA AACTTACCAA GGACGTGCGT CTGTACTGCC AACGCTGCAT TGACAGCGGC AAGGAAATTC AGCTCCAGCT CGCGATCAAG GCGAAAACGA TCACTCAGGG CTTGAAGTAT TCCCTCGCCA CCGGTAACTG GGGATCGCAA GGAGCTGCAG ATATTCGGGC AGGTGTCAGC CAAGTGCTAA ACCGCCTTTC GTATTCGTCC ACCTTGTCGC ATCTTCGTCG CATCAACTCT CCGATCGGTC GTGAGGGTAA ATTGGCCAAG CCTCGTCAGC TGCACAACTC ATTGTGGGGT ATGATTTGTC CCGCGGAGAC TCCCGAAGGC CAAGCTGTCG GTTTGGTGAA GAACCTCGCG CTCATGGCTC TCGTTTCCGT CGGTTCTCCC TCGGAGCCGA TCTTGGAGTT CTTGGACGAG TGGACCATGG AAAACTTGGA AGAAATCTCT CCGTCGTTGA TTGCTGAGTC GACGAAGATT TTCCTGAACG GCGTGTGGGT TGGCGTGCAT CGGAACCCGG CGGATTTGGT CAGAACGCTG CGCAAGCTTC GCCGTCAGTG TGACATCGAT TCTTCAGTGA GTGTCGTGCA CGACATTCGG TTGAAAGAGC TTCGATTGTA CACCGATTAC GGTAGATGTA CGCGTCCGCT CTTCATCGTC GAGGACGATC AAAAACTCAA GATCAAAAAG CAACACATCG AATTGTTGAC GGAGAAGGAC GTCACAGGGT ACACCTGGAA CGAACTCGTC ACGTCGGGTT TTATCGAGTA CGTCGACACT GAAGAAGAGG AAACGACCAT GATTTCCATG ACCATCGATG ATCTTGTTGC CGGTCGCCAC GCGGTCGAGC AAAACACCGG CGTTGCGATC AACTACACGC ACTGCGAGAT TCACCCGTCG ATGATTCTTG GCATCTGTGC CTCCATTATT CCCTTCCCCG ACCACAACCA GTCGCCGCGT AACACTTATC AAAGTGCGAT GGGTAAGCAA GCGATGGGGA TGTACGTGAC GAACTACCAA ATCCGCATGG ATACCCTCGG TTACGTCATG TTTTACCCGC AAAAGCCACT TGTCACGACG CGCGCCATGG AATACTTGCA CTTCCGCGAG CTTCCCGCTG GTTGCAACGC CGTTGTCGCC ATCATGTGCT ACACCGGTTA CAACCAAGAA GATTCCGTGC TCATGAACCA AAGCGCCATC GATCGCGGCT TGTTCCGTTC TCTCTACTAC AGATCGTTCA AAGACGAGGA GAAGAAGCAA GGCAGCTTGA GCCGAGAAGA GTTCGAGAGA CCAGACAGAG ACACGTGCTT GGGTATGCGT CACGGCACTT ACGACAAACT CGATGACGAT GGTTTGATTT GCCCGGGTAC GCGCGTGAGT GGTGATGATA TCATCATCGG TAAGACGGCG CCGCTTCCCG AAGATGACAC CGCCGTGCTG TCCAAGCGCT TCTCGAAGAA GGATTGCTCC ACGGGCATGA AGCACGCGGA GACTGGCATC ATCGATCAAG TGCTGCTCAC GACGAACGAT CAAGGTTTAC GTTTCGTCAA GCTTCGCGTC CGCTCGATGA GAACGCCGCA GGTTGGCGAC AAGTTTTCTT CGCGTCACGG GCAGAAGGGT ACCGTCGGCA TGACGTACAC GCAAGAAGAC ATGCCGTTCA CGTGCGAGGG TATCACGCCC GATATCATCG TGAACCCTCA CGCTATTCCT TCGCGGATGA CAATCGGTCA GCTCGTGGAG TGTATCATGG GCAAGGTTGC GGCGTGCATG GGCAAGGAAG GGGACGCTAC GCCATTCACC CCGGTTACTG CAGAAGACAT CTCTTCGATG CTGCACAAGT GTGGCTACCA AAAGCGTGGT AACGAAGTCA TGTACAACGG TCACACGGGG CGCATGCTGG ACGCGCAAAT CTTCATCGGT CCGACGTATT ACCAGCGCTT GAAGCACATG GTAGACGATA AGATTCACTC GCGCGGGCGC GGGCCGGTGC AAATCTTGAC TCGTCAACCG ATGGAGGGCC GCTCGAGAGA TGGTGGTCTT CGTTTCGGGG AAATGGAACG AGATTGCATC ATGAGTCATG GTGCTGCCTC TTTCCTCAAG GAACGATTGA TGGATCAATC CGACGCTTAC AGAATCCACG TTTGCCAAAA GTGCGGGTTG ATTGCCGTGG CCAACTTGAA GAACCAAACG TTTGAGTGCT GCAAGAACCC GAGCGAACGT ACGTCGGTCG TCCAAGTCAT GGTTCCGTAC GCTTGCAAAC TTCTGTTCCA AGAGCTCATG AGTATGGCGA TCGCCCCGAG ACTCATCACC GGTTAA
|
Protein sequence | MRVDSREDDE EEEIGQEDAW VVISSFFEEK GLVRQQLDSF NEFIQHTMQE IVDEMREIEL TPEHQHMPGQ DIDSMEKKTY KISFNQIYLS KPMVTEADGY TTTLFPKEAR LRNLTYSAPL YVDMVKEVTT VQPDGETTVE KEILNKNFIG KVPIMLRSDY CSLHGHTDKE LTELGECPYD EGGYFVINGS EKVLIAQERM STNHVYVFEK KQPSKFMWQA ECRSQPERGS RGASSCVMRQ LHAPGTKDAP GPIRCTLPYI RTDIPIFVVF RALGFVADKD ILEHIVYDLA DNEMMEMLRP SIEEAFVIQS QEVALDFIGK RGSAVGVSRE KRIKYAKEIL QKELLPHVGV REDCETKKAY FLGYMIHRLL LCSLGRRPED DRDHYGNKRL DLGGPLLAQL FRQLFRKLTK DVRLYCQRCI DSGKEIQLQL AIKAKTITQG LKYSLATGNW GSQGAADIRA GVSQVLNRLS YSSTLSHLRR INSPIGREGK LAKPRQLHNS LWGMICPAET PEGQAVGLVK NLALMALVSV GSPSEPILEF LDEWTMENLE EISPSLIAES TKIFLNGVWV GVHRNPADLV RTLRKLRRQC DIDSSVSVVH DIRLKELRLY TDYGRCTRPL FIVEDDQKLK IKKQHIELLT EKDVTGYTWN ELVTSGFIEY VDTEEEETTM ISMTIDDLVA GRHAVEQNTG VAINYTHCEI HPSMILGICA SIIPFPDHNQ SPRNTYQSAM GKQAMGMYVT NYQIRMDTLG YVMFYPQKPL VTTRAMEYLH FRELPAGCNA VVAIMCYTGY NQEDSVLMNQ SAIDRGLFRS LYYRSFKDEE KKQGSLSREE FERPDRDTCL GMRHGTYDKL DDDGLICPGT RVSGDDIIIG KTAPLPEDDT AVLSKRFSKK DCSTGMKHAE TGIIDQVLLT TNDQGLRFVK LRVRSMRTPQ VGDKFSSRHG QKGTVGMTYT QEDMPFTCEG ITPDIIVNPH AIPSRMTIGQ LVECIMGKVA ACMGKEGDAT PFTPVTAEDI SSMLHKCGYQ KRGNEVMYNG HTGRMLDAQI FIGPTYYQRL KHMVDDKIHS RGRGPVQILT RQPMEGRSRD GGLRFGEMER DCIMSHGAAS FLKERLMDQS DAYRIHVCQK CGLIAVANLK NQTFECCKNP SERTSVVQVM VPYACKLLFQ ELMSMAIAPR LITG
|
| |