| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_5577 |
|---|
| Symbol | |
|---|
| ID | 4976972 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium gilvum PYR-GCK |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009340 |
|---|
| Strand | + |
|---|
| Start bp | 3455 |
|---|
| End bp | 6289 |
|---|
| Gene Length | 2835 bp |
|---|
| Protein Length | 944 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640459804 |
|---|
| Product | exonuclease V subunit alpha |
|---|
| Protein accession | YP_001136826 |
|---|
| Protein GI | 145226175 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
|---|
| TIGRFAM ID | [TIGR02686] conjugative relaxase domain, TrwC/TraI family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 72 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTGACGA TCTCGCGGCT GAGTCGCTGG AGCATCGGCT ACTACAACGA CACCGCCAAT
CAGGCCCGGC AAGCTTCGAT GGACCGTCAG GCCGCCGGGG GCGGTCTGGG CGAGTACTAC
TCCGAAGGCG ACACCCGGGT CCCGACCTGG GTCGTGGTCG GTGACAAGGC CACCGTCGGT
GAGGCCACCG GCTTAGACGG CGCCGCACTG GACGGCGGGT TTGCTGACAC TGAGGTTGCG
GCGCGGTGGC TCGATGACGG GGTGACTCCC AGCGGGGAGG CGGGGCGGGC GTTCGGGACC
AACGGGGTGC ACGGGTTTGA CCTGATGTTC GCCGCGCCCA AGAGTGTGTC GCTGCTGCGG
TCGCTGACCG ATGACGTGGC CGAGAAGGTC ATGCAGAACG CTCACGTCAC AGCCGTCGAG
GCGGCGATGA CCTACCTGCA TGAACATGCC GGGTACACCC GCGTGCACAA CCGGGTCACG
GGGATGAAGG ATTTGCAGCG GCTGCCCGGG CTGGTGGCTA TCGCTTATCA GCATGAGACG
AGCAGGTGCG GGGACCCGCA CCTGCACACC CATGTCATCG TCCCGAATCG CCAGGCCCGG
GCTGATGGTC GGTTGGTGTC GATCGATTCG AAGTCGCTGT ATCACGAAGC CAAAGCTGCC
GGGATCATCT ACCAGGCCAC GCTGCGTCAC GAGCTGTACG CCGAGCGCGG TTTCGAATGG
GCGCCCGTCG ACGAGCATTC CGGCATGGCC GAAATCGCCG GGGTGACCAA GCGCAGCATC
AAGGCGTGGT CGCAGCGGTC GACGCGGCTG CGGGAATGGG CCAAAGACAA CCTCGTCGTC
GTCGACGGTG AGCCCACCGC CGCGCAATTG GCCACCGCGC AGAAGGCGAC GCGGCCCTCC
AAGCCCGAGC AGCTCGCCTG GGACGAACTC AAAGCGATGT GGCGCGCCGA CGCGCGCGGT
CTGGATCTGG ACCGCGACGC GCACTTCGCC GCACGCGAGG CGCGGCGCGC ACAAGCGCAC
ATTTCCGGGC GGGCGCGCAT CGCGGGCGCG CTAGCGCACA TCGACAAAGC GGCGTTCACC
CGCGCCGATG TCGTCGAGCT GATCGGCGCG GTCATGCCTT ACGACGAATC CCCTGGTGAG
GGCCGGGATG TCCGGGCGCG CATCGAGGAC CTCGCCGCGC GCGTCGGTCT GCGGGTGAGC
GCACCGCGCG CCGCACATGA GCGCGAAGGA CACGAGAAAT ACACGCTGGC CGCGATCCTC
AAGGAGGAGA TGCGCGTCCT CGACGCCGCG GGTGCCACCG ATGCGCGTGC GCGCCTGGAT
GTGCGCTCGA GCGACCTGAC CGCGCTGTCG CCGGATCAGG CGCGCGCGGT ATCCGCGATC
GGCATGTCGC CCTGGTTGGT CAATCCGCTG TCCGCGCCCG CCGGCGCGGG CAAGACGCAC
TCCCTGCAAG CCCTGCGCGC CGCCGCTCAC CGAGTCCACA AAGAGGTGCT GGTGCTCGCT
CCGACCGGGA CGGCGGTCGA TCAAGCCCTC GCCGATGGTG CCGGTGATCA CGGGATGACA
CTCGACAAAG CGCTGCACCA GCTCGATTCC GGTGCCCTGC AACTCGATCA GCGCACCGTG
GTGGTCGTCG ATGAGGCCTC CATGGTGGCC ACCCCCAAGC TGCGCCAGCT GCTGGAGACC
ACTACCGCGG CCCGGGCGAA AGCCGTGCTC GTCGGGGACC CCTACCAGCT GGCCCCGGTC
AAAGCCCGCG GCGGCATGTT CGACCAACTG TGCACCGAGC TGCCCTGGGC TCAGCGCCTG
TCGCAGGTGT GGCGCATGCG CGATCCGGCC GAACGCGACG CCTCGCTAGC GATCCGCAAC
GGGCGCGGTA ACCGGCTCCG CCGAGCGGTC GGCTGGTACC GCAACCACGA CCGACTGCAC
ACCGGCGATC AGGTCAGCAT GGCCGCCGCC GCCCTACGCG CGTATCTCGA TGACCGCGCC
GCCGGGAAGA GCACCCTGCT GGTCTGCGAT ACCTGGGACA TTGCTGATGC CCTCAACCAG
CGCCTGCACG ACACCCTCAC CACCGAGGGA CCCGCTGCGC AGGTGGCCCG CGACCAGACG
GTGCGGGTCG GTGACATCAT CGTCAGCCGC GACAACGACC CCACCATCAC CGTGCATCGC
GGACCCCACC ACGCCGAGGG CCAGGCGGTG GATCAGGTGC GCAACGGCAA CCGGTGGCGC
GTGGCCGGCG TCGACGAAAC CACCAACCGG GTCGCTGCTG AACGGCTCAC CGACAAAGCC
CGCGTTCTGT TCGACGGCGA CTACCTACGC CAGCACGTCC ACCTTGGATA CGCGGTCACC
GTGCATGCCG CTCAAGGTGT CACTGTCGAC ACCGCCCACA CCGTGCTCGG CGAGACCGCT
TCCCGCACCC AGGCCTACGT CGGGCTCAGC CGCGGCCGCC AGACCAACCA CGCCTACCTC
TACACCCGCT TCGGCGGCGA AGCCGACCAC GAACACAGCG CCCCCCACAT CGGTATGCAT
GTGGCGAGGC GCGGCACCAA ACACGCTGCC GCGCAAGCTC TTCAGATGAT TTTGACCAAC
GAAGATCGCC CCCGCACGAT GCATGCCGAA GCCGAACACA CCGCCCGCGA GCACCTTCCC
GACATAGTCG GCGAGGTCCT CGACCGCCAT GAGGAACGCC GCGGCACCTG GCGGGCCGCC
TGGCGCGAGC ATGCGCACTC TCAACAGAGC CTCCACCAGG CCTACGAACG TTTCCGCGCC
GGAGTGGAGC GCAGCACCGG ACGGTCACGC TCCCTCTCCC GCGGTGGCCG CGACGTCGGT
GGCCTCGAAC TCTGA
|
|---|
| Protein sequence | MLTISRLSRW SIGYYNDTAN QARQASMDRQ AAGGGLGEYY SEGDTRVPTW VVVGDKATVG
EATGLDGAAL DGGFADTEVA ARWLDDGVTP SGEAGRAFGT NGVHGFDLMF AAPKSVSLLR
SLTDDVAEKV MQNAHVTAVE AAMTYLHEHA GYTRVHNRVT GMKDLQRLPG LVAIAYQHET
SRCGDPHLHT HVIVPNRQAR ADGRLVSIDS KSLYHEAKAA GIIYQATLRH ELYAERGFEW
APVDEHSGMA EIAGVTKRSI KAWSQRSTRL REWAKDNLVV VDGEPTAAQL ATAQKATRPS
KPEQLAWDEL KAMWRADARG LDLDRDAHFA AREARRAQAH ISGRARIAGA LAHIDKAAFT
RADVVELIGA VMPYDESPGE GRDVRARIED LAARVGLRVS APRAAHEREG HEKYTLAAIL
KEEMRVLDAA GATDARARLD VRSSDLTALS PDQARAVSAI GMSPWLVNPL SAPAGAGKTH
SLQALRAAAH RVHKEVLVLA PTGTAVDQAL ADGAGDHGMT LDKALHQLDS GALQLDQRTV
VVVDEASMVA TPKLRQLLET TTAARAKAVL VGDPYQLAPV KARGGMFDQL CTELPWAQRL
SQVWRMRDPA ERDASLAIRN GRGNRLRRAV GWYRNHDRLH TGDQVSMAAA ALRAYLDDRA
AGKSTLLVCD TWDIADALNQ RLHDTLTTEG PAAQVARDQT VRVGDIIVSR DNDPTITVHR
GPHHAEGQAV DQVRNGNRWR VAGVDETTNR VAAERLTDKA RVLFDGDYLR QHVHLGYAVT
VHAAQGVTVD TAHTVLGETA SRTQAYVGLS RGRQTNHAYL YTRFGGEADH EHSAPHIGMH
VARRGTKHAA AQALQMILTN EDRPRTMHAE AEHTAREHLP DIVGEVLDRH EERRGTWRAA
WREHAHSQQS LHQAYERFRA GVERSTGRSR SLSRGGRDVG GLEL
|
|---|
| |