Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mflv_5497 |
Symbol | |
ID | 4976888 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium gilvum PYR-GCK |
Kingdom | Bacteria |
Replicon accession | NC_009339 |
Strand | + |
Start bp | 236311 |
End bp | 237216 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640459723 |
Product | integrase catalytic subunit |
Protein accession | YP_001136746 |
Protein GI | 145226092 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 0.295724 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.115233 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCCAGA AATACGCGTT CATCGCCGCG GAGCACGCTG ACGGTGCCAC CTTTGCGGGC ATGGCTCCCA CGATCGTGCA GATGCTGAAA TGGCTGGGGG TGTCGAAATC GGGGTTCTAC GAGTGGTGGG GCCGGCCGGC GAGTGCGGCG ATGTGTCGCC GCGAGGAACT CAAGCTCAAG ATCGCCGCAC TGTTCACGTC TTTCGGCGCC GTGTACGGGT ATCGGCGCAT CCACGCCGAG TTGGTCCGCG CCGGTGAACG GGTAGGCCCA GAGTTGGTGC GCACACTGAT GCGCGAGTTG AATCTCGTTG CACTGCAACC GAAACCTTAC AAGCGGACCA CTATCGCCGG CGAGTCCGCC ACCGCGGTGC CTGATCTGGT GGCCCGTGAC TTCACCGCGG ATCGGCCCGG GGTGAAGCTG GTCGGTGACA TCACCTATAT CCGGACCTGG GCTGGGTGGC TGTATTTGGC GACCGTGATC GACTGCTTCA ACAAAGAAGT GATCGGTTAC GCGATGGCCG ATCACATGCG TACCGAGCTG GCCACCGGCG CCCTGGAGAT GGCTGCCCGC AACCACGCCC TGGAACCGGG ATGCATTATG CACACCGACC GCGGGACGCA ATACACCTCG ACCGATTACG CCATTAAAAT CGCCGACCTT GATATGAGAG CCTCGCTGGG GCGGACCGGA ATATGTTGGG ATAACGCGCT CGCAGAATCA TTCTTTGCAG CCCTGAAAAA TGAACGTGTG CACCACATGG TGTATCCGAC GCGGAAGAAA GCAAGAGCTG ATATTGCCCG CTATATCGAA CTGTTCTATA ATCGGCGCAG ACTTCACTCC GCGTTGGGCT ACCGCACGCC GCATGAAGTC CGCATCGAAT ACATGAATTC ACAGCTCGCG GCATAA
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Protein sequence | MSQKYAFIAA EHADGATFAG MAPTIVQMLK WLGVSKSGFY EWWGRPASAA MCRREELKLK IAALFTSFGA VYGYRRIHAE LVRAGERVGP ELVRTLMREL NLVALQPKPY KRTTIAGESA TAVPDLVARD FTADRPGVKL VGDITYIRTW AGWLYLATVI DCFNKEVIGY AMADHMRTEL ATGALEMAAR NHALEPGCIM HTDRGTQYTS TDYAIKIADL DMRASLGRTG ICWDNALAES FFAALKNERV HHMVYPTRKK ARADIARYIE LFYNRRRLHS ALGYRTPHEV RIEYMNSQLA A
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