| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_5377 |
|---|
| Symbol | |
|---|
| ID | 4976768 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium gilvum PYR-GCK |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009339 |
|---|
| Strand | - |
|---|
| Start bp | 110617 |
|---|
| End bp | 112362 |
|---|
| Gene Length | 1746 bp |
|---|
| Protein Length | 581 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640459603 |
|---|
| Product | cytochrome-c oxidase |
|---|
| Protein accession | YP_001136626 |
|---|
| Protein GI | 145225972 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
|---|
| TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 53 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTGCCG ATGCGCCACC GATCGCGGAA CTGGAGGCAC GCCGTCCTTT TCCTGCCCGG
ATGGGCCCGA AAGGCAACCT GATCTACCGG TTGATCACGA CCACCGATCA CAAGCTGATC
GGCATGATGT ATTGCGTCGC GTGTTTCGCC TTCTTCCTCA TCGGTGGGTT GATGGCGTTG
TTCATTCGCA CCGAATTGGC GGTGCCGGGG CTGCAGTTCC TGTCCAACGA GCAGTACAAC
CAGCTGTTCA CGATGCACGG CACCGTGATG CTGCTGTTCT ACGCCACCCC GATCGTGTTC
GGCTTCGCGA ATCTGGTGCT GCCGCTGCAG ATCGGCGCCC CCGATGTCGC GTTCCCGCGA
CTGAACGCCT TCTCGTTCTG GCTCTTCCTC TTCGGCGCGC TGATCGCCAC TGCCGGGTTC
ATCACCCCCG GTGGTGCTGC GGATTTCGGC TGGACCGCCT ACACACCCTT GTCGAGTGCC
ATTTATTCAC CAGGCGCCGG CGCCGACCTC TGGATTCTCG GCCTGATCGT CGGTGGGCTG
GGCACAATCT TAGGCGCGGT CAACATGATT ACCACCGTGG TGTGTATGCG TGCGCCGGGC
ATGACGATGT TTCGGATGCC GATCTTCACC TGGAACATCC TGGTGACCTC GATCCTGGTG
CTGCTGGCGT TTCCGCTCCT GACCGCGGCA TTGTTCGCGT TGGCCGCTGA CCGCCACCTG
GGCGCGCACG TCTACGACCC GGCCAACGGC GGTGTTCTGC TGTGGCAGCA CTTGTTCTGG
TTCTTCGGCC ATCCAGAGGT GTACATCATT GCGCTGCCGT TCTTCGGCAT CGTGTCGGAG
ATCTTCCCGG TGTTCAGCCG TAAGCCGATC TTCGGCTACA CGACCCTGAT CTACGCGACG
CTCGGTATCG CGGCGCTGTC GGTGGCGGTG TGGGCGCACC ACATGTACGC CACCGGTGCG
GTGCTGTTGC CCTTCTTCTC GTTCATGACA TTCCTGATCG CGGTACCGAC GGGCATCAAG
TTCTTCAACT GGATCGGCAC GATGTGGAAG GGGCAGTTGA CGTTCGAGAC ACCGATGCTG
TTCTCCATCG GCTTCATCGT CACGTTCCTG CTCGGTGGCC TGTCCGGTGT GCTGCTGGCC
AGCCCACCGA TCGACTTCCA GGTCACCGAC AGCTATTTCG TGATCGCGCA CTTCCACTAC
GTCCTCTTCG GCACCATCGT GTTCGCCACC TACGCGGGCA TCTACTTCTG GTTCCCGAAG
ATGACGGGCC GCCTGCTCGA CGAGCGCCTC GGCAAACTGC ACTTTTGGCT AACCTTCATC
GGCTTCCACA CCACGTTCCT GGTGCAGCAC TGGCTGGGCA ACGAGGGCAT GCCGCGCCGC
TACGCCGACT ACCTGCCCAG CGACGGCTTC ACCACGCTGA ACATCGTGTC CACCATCGGT
GCATTCATCC TGGGCGCCTC GACGCTGCCG TTCCTGTGGA ACATCTTCAA GAGCTGGCGC
TACGGCGAGG TCGTCACCGT CGACGATCCG TGGGGCTATG GCAATTCGCT CGAGTGGGCC
ACCAGCTGCC CGCCGCCGCG GCACAACTTC ACCGAGCTGC CCCGCATCCG GTCGGAGCGT
CCAGCCTTCG AGCTGCACTA CCCGCACATG GTCGAGCGGA TGCGCGCCGA AGCCCACGTG
GGTCGCGCGC ACGGTCCCGA GGACGGCGAC GTCACCAGGA TCGACGACGT CGAAGTGCGC
ACCTAA
|
|---|
| Protein sequence | MVADAPPIAE LEARRPFPAR MGPKGNLIYR LITTTDHKLI GMMYCVACFA FFLIGGLMAL
FIRTELAVPG LQFLSNEQYN QLFTMHGTVM LLFYATPIVF GFANLVLPLQ IGAPDVAFPR
LNAFSFWLFL FGALIATAGF ITPGGAADFG WTAYTPLSSA IYSPGAGADL WILGLIVGGL
GTILGAVNMI TTVVCMRAPG MTMFRMPIFT WNILVTSILV LLAFPLLTAA LFALAADRHL
GAHVYDPANG GVLLWQHLFW FFGHPEVYII ALPFFGIVSE IFPVFSRKPI FGYTTLIYAT
LGIAALSVAV WAHHMYATGA VLLPFFSFMT FLIAVPTGIK FFNWIGTMWK GQLTFETPML
FSIGFIVTFL LGGLSGVLLA SPPIDFQVTD SYFVIAHFHY VLFGTIVFAT YAGIYFWFPK
MTGRLLDERL GKLHFWLTFI GFHTTFLVQH WLGNEGMPRR YADYLPSDGF TTLNIVSTIG
AFILGASTLP FLWNIFKSWR YGEVVTVDDP WGYGNSLEWA TSCPPPRHNF TELPRIRSER
PAFELHYPHM VERMRAEAHV GRAHGPEDGD VTRIDDVEVR T
|
|---|
| |