| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_5272 |
|---|
| Symbol | |
|---|
| ID | 4976581 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium gilvum PYR-GCK |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009338 |
|---|
| Strand | - |
|---|
| Start bp | 5617577 |
|---|
| End bp | 5618164 |
|---|
| Gene Length | 588 bp |
|---|
| Protein Length | 195 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640459501 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_001136524 |
|---|
| Protein GI | 145225846 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.544163 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGACGGG CACGCAACAC CGACAGCCCC ACCGAGCAGG AGTCGGCGAT CCTGAAGGCC
GCGGCCGAGG AGGTCGCGCT GGTCGGGGTC GGCCGGCTCA GCATGGACGT CGTCGCACGC
CAGGCGGGCG TCAGCCGCAG CACGCTGTAC CGGCGCTTTC CCAGCCGAGA CGCGCTGATC
ACCGAACTGG GCCGCCAGAC GTTCGAGTTC GCGATGGCGC GGCTGCAGAC CGTCGCGATC
GACGACGGTC CACAGCAGGC CGCGGTCGCC GCGTTCCGCG AAGGCGTCCG GCTGCTCACC
GGCGAACCGG TGATGCGCCG CTTCCTGCAG CTCGACGGCG AGTTCACCGC GACGACGGAG
ATGGTCGCCG AGGCCCGGCT GTTCCTGGTC AGCGCCGCGA CGGCGATGGC CAAGGCGCTG
CGCGCCGCCG GCGCGACGAT GCCCGACAGC GAGCTGCTGG CGGTCGCCGA GGTGCACATC
CGTCTCGCGG CGTCGCTGGT GCAGGTGAAC ACCGACGTGC TCGATGTGAC CGACGACGAG
GCCGTCGCGC GGTACGCCCG GACCTACCTC GCGCCGCTGG TGCGGTGA
|
|---|
| Protein sequence | MRRARNTDSP TEQESAILKA AAEEVALVGV GRLSMDVVAR QAGVSRSTLY RRFPSRDALI
TELGRQTFEF AMARLQTVAI DDGPQQAAVA AFREGVRLLT GEPVMRRFLQ LDGEFTATTE
MVAEARLFLV SAATAMAKAL RAAGATMPDS ELLAVAEVHI RLAASLVQVN TDVLDVTDDE
AVARYARTYL APLVR
|
|---|
| |