| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_5174 |
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| Symbol | |
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| ID | 4976485 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium gilvum PYR-GCK |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009338 |
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| Strand | - |
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| Start bp | 5514892 |
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| End bp | 5517003 |
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| Gene Length | 2112 bp |
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| Protein Length | 703 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640459404 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) |
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| Protein accession | YP_001136428 |
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| Protein GI | 145225750 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain
[COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.903635 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGGCC AACCCGGCAT ACCTGCCGAC CTGGTGCGCA CATTGCTGGG TGTGCTCAGG
CAACGTCTCG GCCTCGATAC CGCCTGGTTG TCGTCGTTCC ACGACGACAC GCAGACCATC
GAGGTCCTCG ACGGGGACGC CGCCTCGTTC GGGCTGTCCC CGGGGTTGCG GACACCGCTG
TCGGAGTCCT ACTGCGTGCG TGTCATCGAC GGCCGCCTGC CCTCGGTGGT GCCCGACACG
TCGCAGAACC AGACCACCCA CGCGCTGCCC GTCACCGACG AGATGGGACT GGGCGCCTAC
ATCGGTGTGC CGGTGCCGGG ACATGCCGGG ACCACGTCCG GAATGGTCTG TCTGGTCAGC
CAGGAGCCCA AGCCCTATCT GGGAGACGAC GATCTGCGCC TGGTCAGGCA GGCTGCCGAG
CTCATCGGCA CGCTCATCGA GTCGCCGGTC CGCCAGGCCG ATTCGGTCGA CCGTCGCAGC
GCCATCCGGC GGGTGGTTTC GGAACTCGAC TTCGAGGTGG TCTTCCAGGC CATCCACGAT
GTCGCCAGCG GCAGGGCCGT CGGGGTCGAG GCACTCGCAC GGTTCCCCTG CGAACCGTTT
CGGCCCGACG CGTTCTTCGC CGAGGCCGCG CAGCTGGGCA TCGGCATCCA GCTCGAGCTG
GCCATCGTGC GCCGGGTCCT CTCACTGCTG CCGCAACTGC CCGACGACGT GTTCGTCTCC
ATCAACATCT CACCCGCCGC GGCGCTGGTG GCGCCGTGGA GCGAACTGCT CGCCGACGTC
GAGCCGTCAC GGATCGTCCT GGAGATCACC GAGCACGACG CCGTGCCGAA CTATGGTGCG
CTCGACGACG TGCTCGAGGG GTGCCGCGCG CAGGGCGTGC GGGTGGCCGT CGACGACGTC
GGCGCGGGCT TCGCGTCGTT CTCCCACGTC CTCGAGCTGG CCCCGGAGTT CGTCAAGATC
GACCACTCGA TCATCCGCCA CATCGACGTC GACGACGCTC GACGGCGTCT GGCCCAGGCC
ATCGCCGAGT TCGCCGGTCA GTTCGGTGCG ATGGTGATCG CCGAAGGTGT CGAGAGCCAG
CGTGAACTCG ACGCGGTGCG GGCGGCGGGC ATCGGTTGCG CGCAGGGCTT CTACCTCAGC
CGGCCGAAAG CGCACGGGCA CGGTTTTCCC GCCGCCACCG CAACCGCCGA TCCGAGCGAG
CCTCTTCCGA CGGCCGTCGA CCTGCTGGGG GAGCGGCGGT TCGAGCTGGC GCTGGCGCAT
TCGCCCATCG GCATGGCCGT CGTCGGCCTG GACGGCTCGT TCCTGCGCAC CAACCGCGCG
CTGCGCGCGA TGCTCGGCTA CAGCCGACGA GCCATGTCGG AGCTGACCTT TCAGGACATC
ACCCACCCCG ACGACCTCGA CCTCGACCTC GCCCTGGTCA ACGAGTGCCT AGAGGGGCGC
CGCCGTTCCT ACCGCATCGA CAAGCGCTAC ATCGCCGCCG ACGGCAGCAT CGTGTGGTGC
GCGCTCACCG CGGTCATCGT GCATGCGCCC CGGGACCAGC CGCGCTGCTT CGTCTCTCAG
ATCGTCGACG TCACCGCCGA CCGTCTGCGT GAGGCCGAAC TGGTGCGCCG CGCCAGCACC
GACCCCCTGA CCTCGATCGC CAACCGGTCC GCGGCCTGGA CCCGGCTGGA GCAACTCGAC
CAGAGCGGCG AAGGGTACGG CGTCCTGTTC TGCGACATCG AGAGGTTCAA GTCGGTCAAC
GACCGGCACG GTCACCACGC CGGAGATCAG CTCCTCGTCG AGGTGGCGCA ACGGCTCCAC
GACACCCTGG ACCCCTTCGA CCTCGCCGCC CGCTGGGGAG GCGACGAGTT CCTGGTGATC
ACGCGCTGCG TCGAGGAACC GGCGCTGGCC TGCCTGGCCG ACCGGATCAT CGACCGGATG
GACGGAACCC CGATCACCCT GCCCGGTGGC GCCGAGGAAT CGGTCGCGAT GACGATCGGC
TTCGCCGCGC ACCGGCCTGG CGACGGCCGA TCCGTCGACG ACGTCCTCGA CCTCGCCGAC
CACCAGATGT GCGAGCAGCG ACGACGCCGC CCACGGGTCC GCCGGCGGCT GGGTGTCTCG
CGTCCCCGCT GA
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| Protein sequence | MEGQPGIPAD LVRTLLGVLR QRLGLDTAWL SSFHDDTQTI EVLDGDAASF GLSPGLRTPL
SESYCVRVID GRLPSVVPDT SQNQTTHALP VTDEMGLGAY IGVPVPGHAG TTSGMVCLVS
QEPKPYLGDD DLRLVRQAAE LIGTLIESPV RQADSVDRRS AIRRVVSELD FEVVFQAIHD
VASGRAVGVE ALARFPCEPF RPDAFFAEAA QLGIGIQLEL AIVRRVLSLL PQLPDDVFVS
INISPAAALV APWSELLADV EPSRIVLEIT EHDAVPNYGA LDDVLEGCRA QGVRVAVDDV
GAGFASFSHV LELAPEFVKI DHSIIRHIDV DDARRRLAQA IAEFAGQFGA MVIAEGVESQ
RELDAVRAAG IGCAQGFYLS RPKAHGHGFP AATATADPSE PLPTAVDLLG ERRFELALAH
SPIGMAVVGL DGSFLRTNRA LRAMLGYSRR AMSELTFQDI THPDDLDLDL ALVNECLEGR
RRSYRIDKRY IAADGSIVWC ALTAVIVHAP RDQPRCFVSQ IVDVTADRLR EAELVRRAST
DPLTSIANRS AAWTRLEQLD QSGEGYGVLF CDIERFKSVN DRHGHHAGDQ LLVEVAQRLH
DTLDPFDLAA RWGGDEFLVI TRCVEEPALA CLADRIIDRM DGTPITLPGG AEESVAMTIG
FAAHRPGDGR SVDDVLDLAD HQMCEQRRRR PRVRRRLGVS RPR
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