| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_5143 |
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| Symbol | |
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| ID | 4976454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium gilvum PYR-GCK |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009338 |
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| Strand | - |
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| Start bp | 5472254 |
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| End bp | 5474185 |
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| Gene Length | 1932 bp |
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| Protein Length | 643 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640459373 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_001136397 |
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| Protein GI | 145225719 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain
[COG3447] Predicted integral membrane sensor domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.248831 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.87155 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGACGG GTGGGGACCA CGGGGAAACG GTGCGCCCGT CCGACGCCGA CTGGATGCCG
CCGCTGTCCC GACTGCTCGC CTGGACGCTG GCCGTCGGCG TGGTGTGCTT CGTGGTCCGC
GGCCTCGTGC ATGCCGACAG CTGGTCCTAC GCGATGGCGT GGCCGGCCAT CGCGCCGCAA
CTGGTCGCGC TGCTGACCTC GCCGCGACGC CAGTGGCCGG TGTATCTGGC GTCGTTCGCG
GCGGTCCAGA TCATCCCGGC CCGGCTCGTG CTGGACTTCG CACCCGAGCT CGGCCTCCTG
GCGACGATGA CGACGGTCGT GGCCGCGGCG CTGCTGCTGC ACCGCGATCA GGACTGGGTG
CGCGGCCGCA GCGATTCGCT GCGCAGCTGG CTGCGGTTCC TCGTGCTCGC GTCGGCGGCG
CCGCTGGCGG GCGCTCCCCT CGGTGTCGCC AGCCTGGTGC TCAACGGCGA GGTCGGCACC
ACCGGGTCGG AGCTGCTGAA TGCGGCGATG GCGTGGTACC TCAGCGAGGC CGTCGGCATC
GCGTTCCTCG TACCGCTGAT GCTGCGGTGG GACCACTACC TGCGGCGGGG TCACAGCAGA
CGCGAGGTGC TGTGGTTCGC CGCGATGACC GCGCTGACCG CCGGGCTGTG CGCCGCCGCG
ATCACCGAGT CCAGTTTCGT CCTGATGTTC CTCAGCGGCC TGCCGTCGAT GGCGGTGCTG
ATCCGGTCCG GGATCGCCGG GGCGTTCGCC GCCATGATCG TCGGCCCGGC GACCGTCCTC
GGCGCCACCT TCGCCGGATA CGGACCGTTC GCCGCGTCGC TGCCCACCCC CGGGCAGGCC
ATGATCTCGG CTCAGGTCTT CGTGCTCGGC GCGTTCACGA TGGTCGTCAT GGTCGCGGCC
GCGCTCGAGG ACCGCACGCG GCTCGCCGCG CTCGACAACG CGAGCTACAA AGCCTACGAA
CTGGTCGCCG AGCTGACCGG TGACGTCGTG ATCCTGGTCG ACGCCGAGGG CAACGTGCTG
CGCAGGGCCT CGCCAGGCCA CGAGATCCTC AGCCTCCCCG ACGGCCCGCT CACCAAGGAG
GCATGGCTGG ATCAGGTCCA CCCCGACGAC CGGGCCAGCC GCGCCGACTT CCCGAAGATC
AGCGGGCCCG GACCGTCGGA CCCGTTCCGG ATCCGCAAGA GCGACGGGAC ATGGGGGTGG
TACGTCGTGC ACAGCCGGCG CACCGAGGAC GGGTTGACCG TCGCGGTGCT GCGCGACGTG
ACGCTGGAAC GCGAGGTGCA GGAGTCGCTG ACCGACATGG CGAACACCGA CCCGCTGACC
GGGCTGGCCA ACCGGCGCGG CCTCGCCCAG CACGCCGCCG ACCTGTGGTC GCGCGCCCGC
GCCGCCGGCG AACAGGTCAC CGCGCTGTTC ATCGACCTGG ACCACTTCAA GTCGTTCAAC
GATCTCTACG GGCATCAGGC CGGGGACGAG TGTCTGCGCC GGGTCGCCGA CGTGCTCGCG
CACCTGGCCG ACGACAGCGT CTGTGTGGCC GCCCGTTACG GCGGCGAGGA ATTCGCCGTC
GTGCTGGTCG GCTGTGACGC GCCACAGGAG TTCGCCGACG GGCTGGCCGC GGCGATCCGC
GCGCTGAGGA TCCCGCACCT CGGGACGGAC TCGGGAATGG TCACGATCAG CGTCGGCGTC
GCGACACTGC GGCCCTGGCA CACCACCGAC TCCGACGCCG AGGCGGTCGT CGCCGAACTG
CTCGACCGCG CCGACAAGGC CCTCTACGTC GCCAAGTCGA GGGGACGCAA CGCGATCTCG
ATCTACGGCG ACGACACCGC GCTCAGGGAC GGCGCCGCGC TCAGGGACGG CGTCGTTTTA
CTCGGCGAGC AGGTTCACCA CACCGCGAAA CACCCGCGGG AGGCGGCAGG CGGCAGGCGG
CCGGCACGAT GA
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| Protein sequence | MATGGDHGET VRPSDADWMP PLSRLLAWTL AVGVVCFVVR GLVHADSWSY AMAWPAIAPQ
LVALLTSPRR QWPVYLASFA AVQIIPARLV LDFAPELGLL ATMTTVVAAA LLLHRDQDWV
RGRSDSLRSW LRFLVLASAA PLAGAPLGVA SLVLNGEVGT TGSELLNAAM AWYLSEAVGI
AFLVPLMLRW DHYLRRGHSR REVLWFAAMT ALTAGLCAAA ITESSFVLMF LSGLPSMAVL
IRSGIAGAFA AMIVGPATVL GATFAGYGPF AASLPTPGQA MISAQVFVLG AFTMVVMVAA
ALEDRTRLAA LDNASYKAYE LVAELTGDVV ILVDAEGNVL RRASPGHEIL SLPDGPLTKE
AWLDQVHPDD RASRADFPKI SGPGPSDPFR IRKSDGTWGW YVVHSRRTED GLTVAVLRDV
TLEREVQESL TDMANTDPLT GLANRRGLAQ HAADLWSRAR AAGEQVTALF IDLDHFKSFN
DLYGHQAGDE CLRRVADVLA HLADDSVCVA ARYGGEEFAV VLVGCDAPQE FADGLAAAIR
ALRIPHLGTD SGMVTISVGV ATLRPWHTTD SDAEAVVAEL LDRADKALYV AKSRGRNAIS
IYGDDTALRD GAALRDGVVL LGEQVHHTAK HPREAAGGRR PAR
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