| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_5130 |
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| Symbol | |
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| ID | 4976441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium gilvum PYR-GCK |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009338 |
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| Strand | + |
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| Start bp | 5453169 |
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| End bp | 5456498 |
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| Gene Length | 3330 bp |
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| Protein Length | 1109 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640459360 |
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| Product | exodeoxyribonuclease V, beta subunit |
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| Protein accession | YP_001136384 |
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| Protein GI | 145225706 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
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| TIGRFAM ID | [TIGR00609] exodeoxyribonuclease V, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.915993 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGCCGT TCGATCTGCT GGGCGCCCTG CCCGAGCCGC GCACCACGAC GGTGCTGGAG
GCCAGCGCGG GGACGGGCAA GACGTTCGCG CTGGCCGGTC TGGTCACCCG GTATGTCGCC
GAGGGGGTGG CCACCCTGGA CCGGATGCTG CTGATCACCT TCGGCCGCGC CGCCAGCCAG
GAGCTGCGGG AGCGGGTGCG CTCCCAGATC GTGGATGCAC TCCGGGCTTT CGACGATCCG
GCCGCCATCG GTGACAACGA GGTCGTCCGC CACCTGGTGA CGGGCGACGC CGAAGAGTGC
GACGCCCGCC GGCGGCGGTT GCGCGACGCG CTGGCCGGCT TCGACGCCGC GACGATCGCG
ACCACCCACC AGTTCTGCCA GCTGGTGCTG CGCTCGCTCG GGGTGGCCGG CGACACCGAT
TCCGGTGTGG AGCTGGTGGA GAGCCTCGAC GACCTGGTCG CCGAGATCGT CGACGATCTG
TACCTCGCCC ACTTCGGACA GGACCGCGAC GAGCCGTTGC TGACCCACGA GTCCGCGCTG
CGGCTCGCCC ATGCGGTCGT CGGCAATGCG CACACCGAGC TGCGGCCGCG CGACCCCGCG
CCGGGTTCGG ATGCCGCGGT CCGGGTCGAG TTCGCCAAAG CCGTCTGTGC CGAACTGGAA
ACGCGCAAGC GCAAACTCGG CATCCTGCAC TACGACGACC TGCTCTCGCG ACTGGCCGAC
GCGCTGGAGG CGCCGGACTC CCCGGCCCGG GCACGGATGC AGCGCCGGTG GTCGATCGTG
ATGGTCGACG AGTTCCAGGA CACCGACCCG GTGCAGTGGC AGGTGATCGA CCGCGCGTTC
CGCGGACACG CCACCCTCAT CCTGATCGGC GACCCGAAGC AGGCCATCTA CGCGTTCCGC
GGCGGCGACA TCGTGACGTA TCTGCACGCC GCGGCGACGG CGGGCGTGCA GAGGACGCTG
GGCACCAACT ACCGCAGCGA CGCACCGCTG GTCGAGGGCC TGCAGGCGGT CATGCGCGAC
GCACAGCTCG GCGATCCCCG CATCGTGGTG CGCAGGGTCG ACGCGCATCA CCGCGAGCAC
CGGCTGCAGG GCGCACCACA CAACGAGCCG TTCCGCCTGC GGGTGTGCAC ACGCGACCAG
TTCCGCGTCC GGCCCGACCG CATGATCCCG ATCGACGTGC TGCGCAACCA CATTCCGAAG
GACATGGCCG CCGACATCGC CGCGCTGCTG AACTCCGGTG CCACCCACTG CGGTGAGAAG
CTTGCGCCCG GCCACATCGC GGTCATCGTC GAGAGCCACC GCGACGGGCA CGCGTGCTTC
GCCGCGCTCG CCGACGCCGG GATCCCCGCG GTCTACACCG GCGACTCGGA TGTGTTCTCC
TCCCCCGCCG CCGACGACTG GATGTGCCTG CTGGAGGCCT TCGACCAGCC GCACCGGTCG
GGCCTGGTGC GCGCGGCGGC CACCACGATG TTCTTCGGCG AGACCGCGGA AGCGCTGGCC
CTGCAGGGTG ATTCGCTGAC CGACCGGATC GCCGAGACAC TGCGGCAGTG GGCCGACTTC
GCGCGTGAGC GGGGGGTGGC GGCGGTGTTC GAGGCCGCCC AGTTGCGCGG CATGGGCGCA
CGTGTCCTGC GGTGGGTGGA CGGCGAACGC CACATGACCG ATCTGGCCCA CCTGACCCAG
CTGCTGCACG ACACCGCCCA CCGCGAGCAG TACAGCCTGC CCGCGCTGCG CGACTGGCTG
CGCGCCCAGC GTGACGACCG GGGCGGTCTG CGCGGCACGG TCGAACGCAA CCGTCGCCTC
GACAGCGACG CCGCCGCGGT GCAGATCATG ACGGTGTGGG TCAGCAAGGG TCTGCAGTTC
CCGGTGGTGT ACCTGCCGTT CGCGTTCAAC CGCAACGTCC AGCCGCGCGA CGTCGTCGTC
TTCCACGAAC CCGCGACATC CGACGGGGCC GGCGACATCC GCTGTCTGCA CATCGGCGGT
GAGTCCAGCC CCGATTTCGC CGCGGTCGCG CAGCAGGCAC GGCTCGAGGC CGCCGGTGAC
GATGTCCGGC TCACCTATGT CGCGATGACG CGCGCCCAGT CGCAGGTGGT GGCGTGGTGG
GCGCCGTCGC GCGACGAGCT CAACGGCGGG CTGTCGAGGC TGCTGCGCGG CCGGGCGCCC
GGCGACCCGG TGGTGCCGGA TCGCTGCGAC CCGGCCCGCA TCGACGACGC CGAGGCGATG
GCGCGGCTGC GCGCGTGGGC CGACGAAGGC GGGCCCGTCC TGGAGGAGTC GATCATCGCC
GAGCGGGTCG AGGTCGAATT GCCCGCTCCG CCGGACACTC TCGCGGTCCG CCACTTCCAC
CGGCGCATCG ACCCGTTGTG GCGGCGCACC TCGTACTCCG GGCTGATCCG GGCGGCCGAG
CAAGAGTCCG GGGTCGGCAG CGAGCCGGAG GTGGTGGAGC TCGACGACGA GGTCGCCGAG
CTCCGGGCGC CTGACACCGA GCCTGCCACA CCGGATGTCG ACATGGCGTC CCCGATGGCC
GGGCTCCCGA TGGGCGCGAA GTTCGGGACG CTGGTGCACG CCGTCCTGGA GACCGCGGAC
CCGTTCGCGG TCGACCTGGC GGCCGAACTC GAGGCCGCCG TCGTGGAGCA TTCCCTGTGG
TGGCCCGTCG ACGTGCCGCC GGCCGAGCTC GCCGCCGCAC TGGTGCCCTT GCACGACACC
CCGCTGGGTC CGTTGGCTCC CGGGGTCACC CTGCGCGACA TCGGATTGCG GGACCGGTTG
CGGGAGATGG AGTTCGAGTT CCCCCTCGCC GGGGGCGACC GCCGCGACGA CACGCCCGAC
ATCACGCTCG CCGACGTCGG GCGCCTGCTG CGCGCGCACC TGCCCGCAGA CGATCCGCTC
GCCCCGTACG CCGCCCGGCT CACCACGGGC GCGCTCGCCG GCCAGCCGCT GAAGGGGTAT
CTGAACGGGT CGCTGGACGC GGTGCTGCGC GTCGACGGCC GCTACCTCGT GGTCGACTAC
AAGACGAACT GGCTCGGCGA TCCGGCCGGC GAGCTCACCG CTGCGGACTA CGCGCCGGCA
CGGCTGGCCG AGGCCATGCT GCACTCCGAC TACCCGCTGC AGGCGCTGCT GTACTGCGTT
GTGCTGCACC GGTTCCTGCG CTGGCGCCAG CCGGGCTACT CCGCGCGGCG ACACATCGCG
GGTGTGCTGT ACCTGTTCGT GCGTGGCATG TGCGGACCCG ACACCCCGGT CCTCGACGGA
CATCCCGCCG GGGTGTTCAG CTGGCAGCCC CCGGCGGCGC TGATCGAGGA GCTGTCGGAT
CTGCTCGACG CGGGAGCGGT GCCGGCATGA
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| Protein sequence | MEPFDLLGAL PEPRTTTVLE ASAGTGKTFA LAGLVTRYVA EGVATLDRML LITFGRAASQ
ELRERVRSQI VDALRAFDDP AAIGDNEVVR HLVTGDAEEC DARRRRLRDA LAGFDAATIA
TTHQFCQLVL RSLGVAGDTD SGVELVESLD DLVAEIVDDL YLAHFGQDRD EPLLTHESAL
RLAHAVVGNA HTELRPRDPA PGSDAAVRVE FAKAVCAELE TRKRKLGILH YDDLLSRLAD
ALEAPDSPAR ARMQRRWSIV MVDEFQDTDP VQWQVIDRAF RGHATLILIG DPKQAIYAFR
GGDIVTYLHA AATAGVQRTL GTNYRSDAPL VEGLQAVMRD AQLGDPRIVV RRVDAHHREH
RLQGAPHNEP FRLRVCTRDQ FRVRPDRMIP IDVLRNHIPK DMAADIAALL NSGATHCGEK
LAPGHIAVIV ESHRDGHACF AALADAGIPA VYTGDSDVFS SPAADDWMCL LEAFDQPHRS
GLVRAAATTM FFGETAEALA LQGDSLTDRI AETLRQWADF ARERGVAAVF EAAQLRGMGA
RVLRWVDGER HMTDLAHLTQ LLHDTAHREQ YSLPALRDWL RAQRDDRGGL RGTVERNRRL
DSDAAAVQIM TVWVSKGLQF PVVYLPFAFN RNVQPRDVVV FHEPATSDGA GDIRCLHIGG
ESSPDFAAVA QQARLEAAGD DVRLTYVAMT RAQSQVVAWW APSRDELNGG LSRLLRGRAP
GDPVVPDRCD PARIDDAEAM ARLRAWADEG GPVLEESIIA ERVEVELPAP PDTLAVRHFH
RRIDPLWRRT SYSGLIRAAE QESGVGSEPE VVELDDEVAE LRAPDTEPAT PDVDMASPMA
GLPMGAKFGT LVHAVLETAD PFAVDLAAEL EAAVVEHSLW WPVDVPPAEL AAALVPLHDT
PLGPLAPGVT LRDIGLRDRL REMEFEFPLA GGDRRDDTPD ITLADVGRLL RAHLPADDPL
APYAARLTTG ALAGQPLKGY LNGSLDAVLR VDGRYLVVDY KTNWLGDPAG ELTAADYAPA
RLAEAMLHSD YPLQALLYCV VLHRFLRWRQ PGYSARRHIA GVLYLFVRGM CGPDTPVLDG
HPAGVFSWQP PAALIEELSD LLDAGAVPA
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