Gene Mflv_5129 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_5129 
Symbol 
ID4976440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp5449918 
End bp5453169 
Gene Length3252 bp 
Protein Length1083 aa 
Translation table11 
GC content72% 
IMG OID640459359 
Productexodeoxyribonuclease V, gamma subunit 
Protein accessionYP_001136383 
Protein GI145225705 
COG category[L] Replication, recombination and repair 
COG ID[COG1330] Exonuclease V gamma subunit 
TIGRFAM ID[TIGR01450] exodeoxyribonuclease V, gamma subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0179444 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCTGC ACCTCCATCG GGCCGACCGC ACCGATCTGC TCGCCGACGG CCTCGGCGCG 
ATGCTGTCGG ATCCGCCCGC CGATCCGTTC GCCGAGGACC TCGTCCTGGT GTCGGCCCGC
GGCACCGAAC GCTGGCTGAG CCAACGCCTG TCGCATGTGC TCGGGCGAGG GTCGGGGCAG
GACGGGATCT GCGCGGGGGT GACGTTCCGC CATCCGCGGT CGCTGATCGC CGAGCTCACC
GGAACCCGCG AGCACGATCC GTGGTCACCG GACGCGATGG TGTGGCCGCT GCTGGCCGTC
ATCGACGACT GCCTCGCCGA GCCGTGGTGC TCGACGCTGG GCGCGCACCT CGGCCACTTC
GCCGACGGTG AGGAGAGGGA GCTCCGGCAG GGCAGGCGGT ACGCGGTGGC GCGGCGCCTG
GCCGGACTGT TCGCCTCCTA TGCGACGCAA CGGCCGCGGC TGCTCGAGGA CTGGCTGGCC
GGCCGCACCG ACGGTCTCGA TGCCGACCTG CGGTGGCAGC CCGAGCTGTA CCGTGCGCTC
GTCGATCGGG TACAGGCCGA TCCGCCTCAC GTCCGGCACG CCGAAACCGT TGCGCGGCTT
GTCGACTCGC CGACGGACCT CCCGGAACGG CTGTCGTTGT TCGGGCACAC CCGGTTGCCG
GTCACCGAGA TCGAGCTGCT GGCCGCGGTG GCCACACACC ACGACCTGCA CCTGTGGCTG
CCCCACCCCA GCGATGCGCT GTGGACCTCG CTGCGCGACG TGCGGGACGT GATCCCGCGT
CGCGACGACA CGTCCCACCG CCGGGTCGGG CATCCGCTGC TGGCCACCCT CGGTCGCGAC
CTGCGCGAGC TGCAGCGCTG CCTGCCGACC GACACCGTGT CCGACGAGTC TCTGGGATCG
GTCGCCCGCC CCGACACGCT GCTGGGTTGG CTGCAGTCCG ACATCGGCGC CGATCGCGTG
CGCGCCGAGG GCCGTACCCA CGATGCCGGT GACCGATCCG TGCAGGTGCA CAGCTGCCAC
GGTCCGGCCC GTCAAGTGGA CGTGCTGCGC GAAGTGCTGC TGGGCATGCT CGAGGACGAT
CCGACGCTGG AGCCCCGCGA CATCCTCGTC ATGTGCCCCG ACATCGAGGC CTACGCACCG
CTGATCGTCG CGGGCTTCGG CCTCGGGGAT GTCGTCTCCG GTGCGCATCC CGCGCACCGG
CTGCGGGTCA AGCTCGCCGA TCGTGCGCTG ACCCAGACCA ATCCGCTGCT CGGGGTCGCG
CGCCGGCTGC TGGAGCTGGC GGGGAGCCGG GCCACCGCCG GCGAGGTGCT CGACGTCGCG
GAGGCGGCAC CGGTGCGGGC ACGGTTCGGC TTCTCCGACG ACGACCTCGA CGCGGTCGGC
ACCTGGGTGC GGGAGTCGAA CATCCGCTGG GGTTTCGACC GTGACCACCG CCGTCCCTAC
GGGGTGGACT TCGTCCAGAA CACCTGGCGT TTCGGCATCG ACCGGGTGCT CGCCGGGGTC
GCGATGAGTG ACGACTCGCG CGCCTGGCTC GACACCACAC TCCCGCTCGA CGACGTCAGC
AGCAACCGGG TCGAGCTCGC CGGCCGGCTC GCCGAGTTCG TCGACCGGCT CCGCGATGCC
GTCGAATCCC TCACCGGCAC AGCGATGTTG GCCGACTGGC TGGCGCGGAT CCGCACCGGG
GTGTCGGAGT TGACCGCGGT GCCAGACAGC GACCTGTGGC AGCACAGCCA GTTGGAGCGC
GAACTCGCCG ACATCGCTGC CGCGGCGGGG GTGCACGCCG GCACCGAACT GCGCCTGTCG
GACGTCCGGT CGCTGCTGGA CCGGCATCTC GCCGGACGGC CGACCCGCGC CAACTTCCGG
ACGGGCACGC TGACGGTGTG CACGATGGTG CCGATGCGCT CGGTGCCGCA CCGGGTGGTG
TGCCTGGTCG GCCTCGACGA CGGCGTGTTC CCGCGGGTGG GTGTCGTCGA CGGGGACGAC
GCGCTGGCGC GGGATCCGAT GACCGGGGAA CGCGACATCC GTTCCGAGGA CCGGCAGTTG
CTGCTCGACG CGATCGGGGC CGCCACCGAG AAGTTGGTGA TCACCTATAC CGGCGCCAAC
GAGTACAGCG GGCAGCGCAG GCCGCCGGCG GTCCCTGTCG TCGAGTTGCT CGACACCCTC
GACGTGACCA CCTCCTCTCC GGTCCGCGAC CGTGTCCACA CCTCACATCC GTTGCAGCCG
TTCGACATCG CCAACGTCAC CCCCGGTGAA CTCGGCATGC CGGTGGGCAC ACCCTTCACC
TTCGACCCCA CGACACTGAC CGCGGCACGG GCCACCACCG GCGACCGCGA GGAGCACCGG
CCGCTACTGG CCGAACCGCT GCCCGCACCG CCTGCCGACG ACGTCGCCCT CGACGACCTG
ATCGGGTTCT TCCGGGATCC GGTGAAGGGA TTCTTCCGGG CGCTCGATTT CACGTTGCCG
TGGGACGTCG ACGGCCTCGA CGATGCGATC CCCGTCGACG TCGATGCGTT GCAGGAGTGG
AAGATCGGCC AGCGGTTGCT CGATGACATG CAGCGCGGGA TGTCCCCGGC GCAGGCGCAG
CAGGCCGAGT GGCGCCGCGG TTCGCTGCCG CCGGGACGGC TGGGCTGGCG CAGGGCCCAG
GAGATCACCA CGCGTTCGGC CGCGCTCGCG GCGGCCGCGC AGCAATACCG CACACCCGAC
CCGCACGCCG TCGACATCGA CGTCGCGGTT GGTCCCGCGC GACGGCTCAC CGGCACCGTC
CCGCGACTGT ACGGCGAGCG GATGGTCGCG GTCACCTATT CGAAGCTGGC CGGCCGGCAT
CTGCTGGAAT CGTGGATTCG CCTGGTGGCG TTGACCGCTC ACCGACCCGG CACCGACTGG
ACCGCGGTGT GCATCGGCCG CGGCGACCGC GGCAGACCCA CCAGGGAGCG GCTGCTGGGG
CCGCCGGACT CCGCCGCCGA GGTCCTGGCC GACCTGATCG CGATGTACGA CGCGGGCCGC
CGCGCACCGA TCCCGTTGCC GCTCAAGACG TCCTACGCGT GGGCCGAGAC GGACTTCCAC
CGCGGCCAGC CGCTGCGGGA GGCCGGCTGG AAGTGGAAGA CGGGCCGGTA CCCGGGTGAG
GACCAGGACC CCGCGCACAT CCGCGTGTGG GGACCGCACC TTCCGCTGGA GGATCTCGTC
GCCGCCGGGT TGCCTGGATT CGCGGCCCGA TTGTGGCTGC CGATGCTGCG GGCCGAGAGG
AGTGCGCGCT GA
 
Protein sequence
MALHLHRADR TDLLADGLGA MLSDPPADPF AEDLVLVSAR GTERWLSQRL SHVLGRGSGQ 
DGICAGVTFR HPRSLIAELT GTREHDPWSP DAMVWPLLAV IDDCLAEPWC STLGAHLGHF
ADGEERELRQ GRRYAVARRL AGLFASYATQ RPRLLEDWLA GRTDGLDADL RWQPELYRAL
VDRVQADPPH VRHAETVARL VDSPTDLPER LSLFGHTRLP VTEIELLAAV ATHHDLHLWL
PHPSDALWTS LRDVRDVIPR RDDTSHRRVG HPLLATLGRD LRELQRCLPT DTVSDESLGS
VARPDTLLGW LQSDIGADRV RAEGRTHDAG DRSVQVHSCH GPARQVDVLR EVLLGMLEDD
PTLEPRDILV MCPDIEAYAP LIVAGFGLGD VVSGAHPAHR LRVKLADRAL TQTNPLLGVA
RRLLELAGSR ATAGEVLDVA EAAPVRARFG FSDDDLDAVG TWVRESNIRW GFDRDHRRPY
GVDFVQNTWR FGIDRVLAGV AMSDDSRAWL DTTLPLDDVS SNRVELAGRL AEFVDRLRDA
VESLTGTAML ADWLARIRTG VSELTAVPDS DLWQHSQLER ELADIAAAAG VHAGTELRLS
DVRSLLDRHL AGRPTRANFR TGTLTVCTMV PMRSVPHRVV CLVGLDDGVF PRVGVVDGDD
ALARDPMTGE RDIRSEDRQL LLDAIGAATE KLVITYTGAN EYSGQRRPPA VPVVELLDTL
DVTTSSPVRD RVHTSHPLQP FDIANVTPGE LGMPVGTPFT FDPTTLTAAR ATTGDREEHR
PLLAEPLPAP PADDVALDDL IGFFRDPVKG FFRALDFTLP WDVDGLDDAI PVDVDALQEW
KIGQRLLDDM QRGMSPAQAQ QAEWRRGSLP PGRLGWRRAQ EITTRSAALA AAAQQYRTPD
PHAVDIDVAV GPARRLTGTV PRLYGERMVA VTYSKLAGRH LLESWIRLVA LTAHRPGTDW
TAVCIGRGDR GRPTRERLLG PPDSAAEVLA DLIAMYDAGR RAPIPLPLKT SYAWAETDFH
RGQPLREAGW KWKTGRYPGE DQDPAHIRVW GPHLPLEDLV AAGLPGFAAR LWLPMLRAER
SAR