Gene Mflv_5106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_5106 
Symbol 
ID4976417 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp5431249 
End bp5432208 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content73% 
IMG OID640459333 
Producthelix-turn-helix, type 11 domain-containing protein 
Protein accessionYP_001136360 
Protein GI145225682 
COG category[K] Transcription 
COG ID[COG2378] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.505458 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.201643 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAGA CGACCGGCCG GGTGCTCCAA CTGCTCGGCC TCCTCCAATC GCGCCGGGTG 
TGGAGCGGCG ACGAGCTCGC CGCGCGGCTC CGGGTGACGA CGCGCAGCGT GCGTCGTGAC
ATCGATCGGC TGCGCGAACT CGGCTACCCG GTCCACGCCA GCACCGGTCA CGGCGGTGGG
TACCAGCTGG GGGCCGGCGC CGCGCTTCCG CCGCTGCTGC TCGATCCCGA CGAGGCGGTG
GCGGTCGCCG TGTGTCTGCG GGTCGCCGCG GGCGGCAGCG TCGCCGGAGT CGGGGAGTCG
GCGCTGCGGG CACTGAGCAA ACTCGACCAG GTGATGCCGT CGCGGCTGCG CTCGCAAGTG
GCCGCGGTGC ACGACACGAC GGTGACACTG GCCGGTGCGA CCGACACCCC GGTCGAGCCG
GAGGTGCTGA TGACGCTCGC GCGGGCCAGC CGCGACCACG AGCACGTCAC CGTCGGTTAC
ACCGACGTGC GCGGCAACGT CACCTCGCGC CGCGTGGAGC CCTACCAGCT CGTCACGACC
GGACGGCGCT GGTATCTGAT GTGCTTCGAC CGTGACCGCG ACGACTGGCG CAGCCTGCGG
CTGGACCGGA TGTCGGACGT GCGGGCGGTC GGCACGACGT TCATCCCGCG CGAGGCGCCG
GACGCCGCGT CCTATGTGCG CCGGGCGATC TCGTCGTCGC CGTACCCGTA TGTCGCGCGC
GTGCGGTACC GCGCACCGGC CGACGTCGTC GCCCGGGTGT TCCCGGCGGC GTCGGTGGAC
GTCGAACCGG ACGGACCCGA CGCGTGCATC GTCACGGTCG GGGCCGACGA TCCGCAGCGG
ATGGTCCCGT GGCTGGCGAT GCCGGGCTGC GAGTTCGAGG TGCTCGAACC GGACGAGGTC
GTCGACGCGG TGCGTGTGGT GGCCGAGCGC ATCGCCCGCG CAGGCGCGGG CGGGGATTGA
 
Protein sequence
MSETTGRVLQ LLGLLQSRRV WSGDELAARL RVTTRSVRRD IDRLRELGYP VHASTGHGGG 
YQLGAGAALP PLLLDPDEAV AVAVCLRVAA GGSVAGVGES ALRALSKLDQ VMPSRLRSQV
AAVHDTTVTL AGATDTPVEP EVLMTLARAS RDHEHVTVGY TDVRGNVTSR RVEPYQLVTT
GRRWYLMCFD RDRDDWRSLR LDRMSDVRAV GTTFIPREAP DAASYVRRAI SSSPYPYVAR
VRYRAPADVV ARVFPAASVD VEPDGPDACI VTVGADDPQR MVPWLAMPGC EFEVLEPDEV
VDAVRVVAER IARAGAGGD