| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_5102 |
|---|
| Symbol | |
|---|
| ID | 4976413 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium gilvum PYR-GCK |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009338 |
|---|
| Strand | - |
|---|
| Start bp | 5425041 |
|---|
| End bp | 5425964 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 640459329 |
|---|
| Product | ROK family protein |
|---|
| Protein accession | YP_001136356 |
|---|
| Protein GI | 145225678 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1940] Transcriptional regulator/sugar kinase |
|---|
| TIGRFAM ID | [TIGR00744] ROK family protein (putative glucokinase) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0545007 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACTGA GCATGAGCGA CCTCACTCTG ACGCTCGACA TCGGCGGCAC CAAGCTCGCC
GCGGGCCTCG TCGACGCCGA CGGCAACCTC GTGCGCCGCG CCCAGACCCC GACTCCGGAC
GGGGACGCCG AAACCATCTG GGATGCCGTC GCGTCGCTGT TGGCCGAGAC CCGCTCCGCC
GCCGACTCGA CCATCGGCGC GGTGGGCATC GCGTCGGCCG GCCCCGTCGA CGTTCCCGCC
GGAACCGTCA GCCCGATCAA CATCGCCGAG TGGCACCGGT TCCCGATCGT CGAGCGCGTC
GAGGCCGCGA CCGGGTTGCC GGTGTACCTC GGCGGGGACG GCCTGTGCAT GGCGATGGGG
GAGTGGTGGC GCGGCGCGGG CAGGAACCGC CGCTTCATGC TGGGAATGGT GGTGTCGACC
GGCATCGGCG GCGGCCTCGT TCTCGACGGC GCACCGTTTC ACGGCAGGAC CGGAAACGCC
GGCCATGTCG GCCACGTCGT CGTCGAACCC GACGGCGACG CCTGCACGTG CGGCGGCCGC
GGCTGCGTCG AGACGGTCGC GTCGGGTCCG CATCTCGCCC GGTGGGCACG CGCACACGGC
TGGGAGGGGG CCGACGCCCG TGAGCTCGCC GAGGCCGCCG GCCGAGGCGA GGACGTCGCA
CTGCGCGCGT TCGCCCGGGG TGCCGACGCC GTCGCACGCA CGATCGCGTC GGTCGCGGCG
GTCTGCGACC TCGACCTCGT CGTCGTCGGG GGCGGCGTCG CCAAGGCCGG TTCGCTGCTG
TTCGACCCGC TGCACCAGGC GCTGCGGACC TACGCCGGCC TCGACTTCCT CACCGACCTG
CGGGTGGTGC CGGCCGAGCT CGGCGGCGAC GCCGGTCTGG TCGGCGCCGC CGCGCTGGCC
GCGCATCACG GCCGTTTTGG CTGA
|
|---|
| Protein sequence | MALSMSDLTL TLDIGGTKLA AGLVDADGNL VRRAQTPTPD GDAETIWDAV ASLLAETRSA
ADSTIGAVGI ASAGPVDVPA GTVSPINIAE WHRFPIVERV EAATGLPVYL GGDGLCMAMG
EWWRGAGRNR RFMLGMVVST GIGGGLVLDG APFHGRTGNA GHVGHVVVEP DGDACTCGGR
GCVETVASGP HLARWARAHG WEGADARELA EAAGRGEDVA LRAFARGADA VARTIASVAA
VCDLDLVVVG GGVAKAGSLL FDPLHQALRT YAGLDFLTDL RVVPAELGGD AGLVGAAALA
AHHGRFG
|
|---|
| |