| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_5097 |
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| Symbol | rpoB |
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| ID | 4976408 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium gilvum PYR-GCK |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009338 |
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| Strand | - |
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| Start bp | 5416895 |
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| End bp | 5420419 |
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| Gene Length | 3525 bp |
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| Protein Length | 1174 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640459324 |
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| Product | DNA-directed RNA polymerase subunit beta |
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| Protein accession | YP_001136351 |
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| Protein GI | 145225673 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | [TIGR02013] DNA-directed RNA polymerase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0605321 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTGGAAG GATGCATCTT GGCAGGGTCC CGCCAGATCG AGTCAACCAC TAACAACTCC
GTTCCCGGAG CACCAAATAG AATTTCTTTC GCCAAGCTCC GTGAGCCTCT CGAGGTTCCG
GGGCTTCTCG ACGTTCAGAC CGAATCGTTC GAGTGGCTGA TTGGTGCCGA GGATTGGTTT
CAGCGTGCTG TGGACCGCGG AGATGTAGAC CCCAAGGGCG GTCTGCAGGA GGTACTCGAA
GAGCTCTCGC CGATCGAAGA CTTCTCCGGC TCGATGTCGC TGTCGTTCTC CGATCCGCGC
TTCGACGAGG TCAAGGCCCC GGTCGATGAG TGCAAAGACA AGGACATGAC GTACGCGGCT
CCGCTGTTCG TCACGGCCGA GTTCATCAAC AACAACACCG GCGAGATCAA GAGCCAGACG
GTCTTCATGG GTGACTTCCC GATGATGACC GAAAAGGGCA CCTTCATCAT CAACGGCACC
GAGCGTGTCG TCGTGAGCCA GCTGGTCCGG TCGCCTGGTG TGTACTTCGA CGAGTCGATC
GACAAGTCCA CCGAGAAGAC GCTGCACAGC GTCAAGGTCA TCCCCGGCCG CGGCGCGTGG
CTGGAGTTCG ACGTCGACAA GCGCGACACC GTCGGTGTGC GCATCGACCG CAAGCGCCGT
CAGCCCGTCA CCGTGCTGCT CAAGGCGCTC GGCTGGACCA ACGAGCAGAT CGTGGAGCGC
TTCGGCTTCT CCGAGATCAT GATGAGCACG CTGGAGAAGG ACAACACCGC CGGCACCGAT
GAGGCGCTGC TCGACATCTA CCGGAAGCTG CGCCCGGGCG AGCCGCCGAC CAAGGAGTCC
GCGCAGACCC TGCTGGAGAA CCTGTTCTTC AAGGAGAAGC GCTACGACCT GGCCCGCGTC
GGCCGCTACA AGGTCAACAA GAAGCTCGGG CTCAACGTCG GTCAGCCGAT CACCAGCTCG
ACGCTGACCG AAGAGGACGT CGTCGCGACC ATCGAGTATC TGGTCCGCCT GCATCAGGGT
GACCAGACGA TGACCGCGCC CGGCGGCTCC GAGGTGCCCG TCGAGGTCGA CGACATCGAC
CACTTCGGCA ACCGTCGTCT GCGCACCGTG GGCGAGCTGA TCCAGAACCA GATCCGCGTG
GGCCTGTCCC GCATGGAGCG TGTCGTGCGT GAGCGCATGA CCACCCAGGA CGTCGAGGCG
ATCACGCCGC AGACCCTGAT CAACATCCGT CCCGTCGTGG CGGCGATCAA GGAGTTCTTC
GGCACCAGCC AGCTCTCGCA GTTCATGGAT CAGAACAACC CGCTGTCGGG CCTGACCCAC
AAGCGCCGCC TGTCGGCGCT GGGCCCCGGT GGTCTGTCTC GTGAGCGTGC CGGCCTCGAG
GTTCGCGACG TGCACTCCAG CCACTACGGC CGCATGTGCC CGATCGAGAC CCCGGAAGGC
CCGAACATCG GCCTGATCGG CTCGCTGTCG GTGTACGCGC GGGTCAACCC GTTCGGCTTC
ATCGAGACCC CGTACCGCAA GGTCGTCGAC GGCGTCGTCA GCGATCAGAT CGACTACCTG
ACCGCCGACG AGGAGGACCG CCACGTCGTG GCGCAGGCCA ACTCGCCGCT CGACGGTGAC
GGTCGTTTCG AGGAGGAGCG CGTCCTGGTC CGCCGTAAGG GCGGCGAGGT CGAGTTCGTC
TCGGCGAGCG AGGTCGACTA CATGGACGTC TCGCCGCGCC AGATGGTGTC GGTCGCGACG
GCGATGATCC CGTTCCTCGA GCACGACGAC GCCAACCGCG CCCTGATGGG TGCGAACATG
CAGCGCCAGG CGGTTCCGCT GGTCCGCAGC GAGGCGCCGT TGGTCGGTAC CGGCATGGAA
CTGCGTGCCG CGATCGACGC CGGCGACGTT GTCGTCACCG ACAAGGCCGG CGTGGTCGAG
GAGGTCTCGG CCGACTACAT CACCGTGATG GCCGACGACG GCACCCGGCA CACCTACCGG
ATGCGCAAAT TCGCCCGCTC CAACCACGGC ACGTGCGCCA ACCAGCGCCC GATCGTGGAC
GCCGGGCAGC GCGTCGAGAC CGGTCAGGTT CTCGCCGACG GTCCGTGCAC CGAGAACGGT
GAGATGGCGC TGGGCAAGAA CCTGCTCGTC GCGATCATGC CGTGGGAGGG TCACAACTAC
GAGGACGCGA TCATCCTGTC CAACCGCCTG GTTGAAGAGG ACGTGCTGAC CTCGATCCAC
ATCGAAGAGC ACGAGATCGA TGCCCGCGAC ACCAAGCTGG GCGCCGAGGA GATCACCCGG
GACATCCCGA ACGTCTCCGA TGAGGTGCTG GCAGATCTCG ACGAGCGCGG CATCATCCGC
ATCGGCGCCG AGGTCCGCGA CGGCGACATC CTGGTTGGCA AGGTCACGCC GAAGGGCGAG
ACCGAGCTGA CCCCCGAGGA GCGCCTGCTG CGCGCCATCT TCGGTGAGAA GGCCCGCGAG
GTCCGCGACA CGTCGCTGAA GGTTCCGCAC GGTGAGTCCG GCAAGGTCAT CGGCATCCGC
GTGTTCTCGC GCGAGGACGA CGACGAGCTG CCGGCCGGTG TCAACGAGCT GGTCCGCGTC
TACGTGGCCC AGAAGCGCAA GATCTCCGAC GGCGACAAGC TCGCCGGACG CCACGGCAAC
AAGGGCGTCA TCGGCAAGAT CCTGCCCGTC GAGGACATGC CGTTCCTCCC GGACGGCACC
CCGGTGGACA TCATCCTGAA CACCCACGGT GTGCCGCGTC GTATGAACAT CGGCCAGATC
CTGGAGACCC ACCTCGGGTG GGTTGCCAAG GCGGGCTGGA ATATCCGGCT TGCCAGTGAT
GGAGCGGACG GCTCGACCGA GGTTCCCGCG TGGGCAGCCA AGCTGCCCGA GCACATGTTG
TCGGCCCCGG CGGACAGCAT CGTGGCGACC CCGGTGTTCG ACGGTGCGCA GGAAGGTGAG
CTGCAGGGCC TGCTCGGCGC GACGCTGCCG AACCGCGACG GAGAGACGAT GGTCAACTCC
GACGGCAAGG CGGTGCTGTT CGACGGCCGC AGTGGCGAAC CGTTCCCGTA CCCGGTGACG
GTCGGCTACA TGTACATCCT GAAGCTGCAC CACCTGGTCG ACGACAAGAT CCACGCGCGT
TCGACCGGTC CGTACTCGAT GATCACCCAG CAGCCGCTCG GTGGTAAGGC GCAGTTCGGT
GGTCAGCGTT TCGGCGAGAT GGAGTGCTGG GCCATGCAGG CCTACGGCGC GGCCTACACG
CTGCAGGAGC TGCTGACGAT CAAGTCCGAC GACACCGTCG GTCGCGTGAA GGTCTACGAG
GCCATCGTCA AGGGCGAGAA CATCCCCGAA CCCGGTATCC CGGAGTCGTT CAAGGTGCTT
CTCAAGGAGC TGCAGTCGCT GTGCCTCAAC GTCGAGGTCC TGTCCTCGGA CGGTGCGGCG
ATCGAAATGC GTGACGGAGA CGACGAGGAC CTGGAGCGTG CTGCTGCCAA CCTCGGAATC
AACCTGTCCC GCAACGAATC CGCCTCTGTC GAAGATCTCG CCTGA
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| Protein sequence | MLEGCILAGS RQIESTTNNS VPGAPNRISF AKLREPLEVP GLLDVQTESF EWLIGAEDWF
QRAVDRGDVD PKGGLQEVLE ELSPIEDFSG SMSLSFSDPR FDEVKAPVDE CKDKDMTYAA
PLFVTAEFIN NNTGEIKSQT VFMGDFPMMT EKGTFIINGT ERVVVSQLVR SPGVYFDESI
DKSTEKTLHS VKVIPGRGAW LEFDVDKRDT VGVRIDRKRR QPVTVLLKAL GWTNEQIVER
FGFSEIMMST LEKDNTAGTD EALLDIYRKL RPGEPPTKES AQTLLENLFF KEKRYDLARV
GRYKVNKKLG LNVGQPITSS TLTEEDVVAT IEYLVRLHQG DQTMTAPGGS EVPVEVDDID
HFGNRRLRTV GELIQNQIRV GLSRMERVVR ERMTTQDVEA ITPQTLINIR PVVAAIKEFF
GTSQLSQFMD QNNPLSGLTH KRRLSALGPG GLSRERAGLE VRDVHSSHYG RMCPIETPEG
PNIGLIGSLS VYARVNPFGF IETPYRKVVD GVVSDQIDYL TADEEDRHVV AQANSPLDGD
GRFEEERVLV RRKGGEVEFV SASEVDYMDV SPRQMVSVAT AMIPFLEHDD ANRALMGANM
QRQAVPLVRS EAPLVGTGME LRAAIDAGDV VVTDKAGVVE EVSADYITVM ADDGTRHTYR
MRKFARSNHG TCANQRPIVD AGQRVETGQV LADGPCTENG EMALGKNLLV AIMPWEGHNY
EDAIILSNRL VEEDVLTSIH IEEHEIDARD TKLGAEEITR DIPNVSDEVL ADLDERGIIR
IGAEVRDGDI LVGKVTPKGE TELTPEERLL RAIFGEKARE VRDTSLKVPH GESGKVIGIR
VFSREDDDEL PAGVNELVRV YVAQKRKISD GDKLAGRHGN KGVIGKILPV EDMPFLPDGT
PVDIILNTHG VPRRMNIGQI LETHLGWVAK AGWNIRLASD GADGSTEVPA WAAKLPEHML
SAPADSIVAT PVFDGAQEGE LQGLLGATLP NRDGETMVNS DGKAVLFDGR SGEPFPYPVT
VGYMYILKLH HLVDDKIHAR STGPYSMITQ QPLGGKAQFG GQRFGEMECW AMQAYGAAYT
LQELLTIKSD DTVGRVKVYE AIVKGENIPE PGIPESFKVL LKELQSLCLN VEVLSSDGAA
IEMRDGDDED LERAAANLGI NLSRNESASV EDLA
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