| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_5096 |
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| Symbol | |
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| ID | 4976407 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium gilvum PYR-GCK |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009338 |
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| Strand | - |
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| Start bp | 5412895 |
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| End bp | 5416845 |
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| Gene Length | 3951 bp |
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| Protein Length | 1316 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640459323 |
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| Product | DNA-directed RNA polymerase subunit beta' |
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| Protein accession | YP_001136350 |
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| Protein GI | 145225672 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR02386] DNA-directed RNA polymerase, beta' subunit, predominant form |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.807097 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0730718 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTAGACG TCAACTTCTT CGATGAACTC CGCATCGGTC TCGCGACCGC GGACGACATC
CGCAACTGGT CCTTCGGCGA GGTCAAGAAG CCGGAGACCA TCAACTACCG CACGCTGAAG
CCGGAAAAGG ACGGCCTGTT CTGCGAGAAG ATCTTCGGAC CGACTCGCGA CTGGGAGTGC
TACTGCGGCA AGTACAAGCG CGTCCGGTTC AAGGGCATCA TCTGTGAGCG CTGCGGCGTC
GAGGTGACCC GGGCCAAGGT GCGCCGTGAG CGGATGGGCC ACATCGAGCT GGCCGCACCC
GTCACGCACA TCTGGTACTT CAAGGGCGTG CCCTCGCGTC TGGGCTACCT GCTCGACCTG
GCCCCGAAGG ATCTCGAGAA GATCATCTAC TTCGCGGCCT ACGTGATCAC CGCGGTCGAC
GACGAGATGC GCCACAACGA GCTCTCGACG CTCGAAGCCG AGATGGTCGT CGAGAAGAAG
GCCATCGAGG ATCAGCGCGA CGCCGACCTG GAGGCGCGGG CGCAGAAGCT CGAAGCCGAC
ATGAAGGAGC TCGAGGAAGA GGGCGCGAAG TCCGACGTGC GCCGCAAGGT GCGCGACGGC
GGCGAGCGCG AGATGCGTCA GCTCCGCGAC CGGGCCCAGC GTGAGCTGGA CCGGCTCGAC
GAGATCTGGA CGACGTTCAC CAAGCTGGCT CCCAAGCAGC TGATCGTCGA CGAGCTGCTC
TACCGCGAGC TGCAGGACCG CTACGGCGAG TACTTCGAAG GCGCCATGGG CGCGGAGTCG
ATCAAGAAGC TCATCGAGAC CTTCGACATC GACGCCGAGG CCGATTCGCT GCGCGACACC
ATCAAGAACG GCAAGGGCCA GAAGAAGCTG CGTGCGCTCA AGCGACTCAA GGTCGTCGCG
GCGTTCCAGA CCAACCGGAA CTCGCCGATG GGCATGGTCC TCGACGCCGT CCCGGTGATC
CCGCCGGAGC TGCGCCCGAT GGTCCAGCTC GACGGTGGCC GCTTCGCGAC GTCGGATCTC
AACGATCTGT ACCGCCGCGT GATCAACCGC AACAACCGTC TCAAGCGACT GATCGACCTC
GGCGCGCCCG AGATCATCGT CAACAACGAG AAGCGCATGC TTCAGGAGTC GGTGGACGCG
CTGTTCGACA ACGGCCGTCG CGGCCGTCCG GTGACCGGGC CGGGCAACCG CCCGCTCAAG
TCGCTGTCCG ATCTACTCAA GGGCAAGCAG GGCCGGTTCC GCCAGAACCT GCTCGGCAAG
CGCGTCGACT ACTCGGGCCG CTCGGTCATT GTTGTCGGCC CGCAGCTGAA GCTGCACCAG
TGTGGTCTGC CGAAGCTGAT GGCCCTGGAG CTGTTCAAGC CGTTCGTGAT GAAGCGTCTC
GTCGACCTGA ACCACGCGCA GAACATCAAG AGCGCCAAGC GCATGGTCGA GCGTCAGCGT
CCGCAGGTGT GGGACGTCCT CGAAGAGGTC ATCTCCGAGC ACCCGGTGCT GCTGAACCGT
GCACCGACGC TGCACCGCCT CGGCATCCAG GCCTTCGAGC CGCAGCTGGT GGAGGGCAAG
GCCATCCAGC TGCACCCGCT GGTGTGTGAG GCGTTCAACG CCGACTTCGA CGGCGACCAG
ATGGCCGTGC ACCTTCCGCT GTCCGCGGAG GCGCAGGCCG AGGCCCGCAT CCTGATGCTG
TCCTCGAACA ACATCCTGTC GCCGGCGTCG GGCCGTCCGC TGGCCATGCC GCGTCTGGAC
ATGGTCACCG GTCTGTACTT CCTGACCACC GAGATCGAGG GCGACAAGGG TGAATTCACC
CCGGCCGCCA AGGATCAGCC GGAGTCCGGT GTGTACAGCA GCCCGGCCGA GGCCATCATG
GCGATGGACC GCGGTGCGCT GAGCGTGCGC GCCAAGATCC GGGTTCGGCT GACGCAGCTG
CGTCCGCCCG CCGAGATCGA GGCCGAGCGG TTCCCCGACG GCTGGAACAT GGGCGACGCC
TGGACGGCGG AGACCACTCT GGGCCGTGTG CTCTTCAACG AGCTGCTGCC GCGGGGCTAC
CCGTTCGTCA ACAAGCAGAT GCACAAGAAG GTGCAGGCCG CGATCATCAA CGATCTGGCC
GAGCGCTACC CGATGATCGT CGTCGCGCAG ACCGTCGACA AGCTCAAGGA CGCCGGCTTC
TACTGGGCCA CCCGCTCGGG TGTCACCGTG TCGATGGCCG ACGTGCTCGT TCCGCCGGAG
AAGCAGGAGA TCCTCGAGCG CTACGAGGCG GCTGCCGACA GCATCGAGAA GCAGTACCAG
CGCGGCAAGC TCGACAAGGG CGAGCGCAAC GAAGCGTTGG TGAAGATCTG GCAGGACGCG
ACCGAAGAGG TCGGTCAGGC GCTGCGCTCG CACTACCCGA AGGACAACCC GATCATCACG
ATCGTGGATT CGGGCGCGAC GGGTAACTTC ACCCAGACGC GGACGCTGGC CGGCATGAAG
GGTCTGGTGA CCAACCCGAA GGGTGAGTTC ATCCCGCGTC CGATCAAGTC CTCGTTCCGC
GAGGGCCTGA CGGTGCTGGA GTACTTCATC AACACCCACG GCGCGCGTAA GGGCTTGGCG
GACACCGCAC TTCGTACCGC CGACTCCGGT TACCTGACCC GTCGTCTGGT CGACGTGTCG
CAGGACGTCA TCGTGCGCGA GACCGACTGT GAGACCGAGC GCGGCATCAC GGTCACGCTG
GCCGAGTTGC AGGGCGATCA GCTGCTGCGT GATCAGCACA TCGAGACGTC CGCCTACGCG
CGGACGCTGG CCACCGACGC GGTCGACGCC AACGGCAACG TTGTCGTCGA GCGTGGTCAC
GATCTCGGTG ACCCGGCGAT CGATGCGCTG CTGGCCGCCG GCATCACCGA GGTGAAGGTC
CGCTCCGTGC TGACCTGCGC CACCGGCACC GGCGTGTGCG CGATGTGCTA CGGCCGCTCG
ATGGCCACCG GCAAGCTCGT CGACATCGGC GAGGCCGTCG GTATCGTCGC TGCGCAGTCC
ATCGGTGAGC CCGGCACGCA GCTGACCATG CGTACCTTCC ACCAGGGTGG CGTCACCGGC
GGTGCCGACA TCGTCGGTGG TCTGCCCCGC GTGCAGGAGC TGTTCGAGGC CCGCATTCCG
CGGAACCGGG CCCCGATCGC CGACGTCTCC GGCCGGATCC GGCTGGAGGA GAGCGACAAG
TTCTACAAGA TCACCATCGT TCCCGACGAC GGGGGCGAAG AGGTCGTGTA CGACAAGCTC
TCGCGTCGTC AGCGCCTGAA GGTGTTCAAG CACGACGACG GCTCCGAGCG TCTGCTCACC
GACGGCGACC ACGTCGAGGT CGGCCAGCAG CTGCTGGAAG GCTCGGCGGA CCCGCACGAG
GTGCTGCGCG TCCAGGGTCC CCGCGAGGTG CAGATCCACC TCGTCAAGGA GGTCCAGGAG
GTCTACCGCG CCCAGGGTGT GTCGATCCAC GACAAGCACA TCGAGGTCAT CGTCCGGCAG
ATGCTGCGTC GCGTCACGAT CATCGATTCG GGTGCGACGG AGTTCCTGCC CGGCTCGCTG
ACCGAGCGTG GCGAGTTCGA GACGGAGAAC CGTCGGGTGG TCGCCGAGGG CGGCGAGCCC
GCGGCCGGCC GTCCGGTGCT GATGGGTATC ACGAAGGCGT CGCTGGCCAC CGATTCGTGG
CTGTCGGCGG CGTCGTTCCA GGAGACCACC CGCGTGCTGA CCGATGCGGC GATCAACTGC
CGCAGCGACA AGCTGCAGGG TCTGAAGGAG AACGTGATCA TCGGCAAGCT GATCCCGGCG
GGCACCGGCA TCAACCGGTA CCGCAACATT CAGGTTCAGC CGACCGAAGA AGCACGTGCG
GCCGCGTACA CGATCCCGTC CTACGAGGAT CAGTACTACA GCCCGGACTT CGGCCAGGCG
ACCGGTGCCG CGGTGCCGCT CGACGACTAC GGCTACTCCG ACTACCGGTA G
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| Protein sequence | MLDVNFFDEL RIGLATADDI RNWSFGEVKK PETINYRTLK PEKDGLFCEK IFGPTRDWEC
YCGKYKRVRF KGIICERCGV EVTRAKVRRE RMGHIELAAP VTHIWYFKGV PSRLGYLLDL
APKDLEKIIY FAAYVITAVD DEMRHNELST LEAEMVVEKK AIEDQRDADL EARAQKLEAD
MKELEEEGAK SDVRRKVRDG GEREMRQLRD RAQRELDRLD EIWTTFTKLA PKQLIVDELL
YRELQDRYGE YFEGAMGAES IKKLIETFDI DAEADSLRDT IKNGKGQKKL RALKRLKVVA
AFQTNRNSPM GMVLDAVPVI PPELRPMVQL DGGRFATSDL NDLYRRVINR NNRLKRLIDL
GAPEIIVNNE KRMLQESVDA LFDNGRRGRP VTGPGNRPLK SLSDLLKGKQ GRFRQNLLGK
RVDYSGRSVI VVGPQLKLHQ CGLPKLMALE LFKPFVMKRL VDLNHAQNIK SAKRMVERQR
PQVWDVLEEV ISEHPVLLNR APTLHRLGIQ AFEPQLVEGK AIQLHPLVCE AFNADFDGDQ
MAVHLPLSAE AQAEARILML SSNNILSPAS GRPLAMPRLD MVTGLYFLTT EIEGDKGEFT
PAAKDQPESG VYSSPAEAIM AMDRGALSVR AKIRVRLTQL RPPAEIEAER FPDGWNMGDA
WTAETTLGRV LFNELLPRGY PFVNKQMHKK VQAAIINDLA ERYPMIVVAQ TVDKLKDAGF
YWATRSGVTV SMADVLVPPE KQEILERYEA AADSIEKQYQ RGKLDKGERN EALVKIWQDA
TEEVGQALRS HYPKDNPIIT IVDSGATGNF TQTRTLAGMK GLVTNPKGEF IPRPIKSSFR
EGLTVLEYFI NTHGARKGLA DTALRTADSG YLTRRLVDVS QDVIVRETDC ETERGITVTL
AELQGDQLLR DQHIETSAYA RTLATDAVDA NGNVVVERGH DLGDPAIDAL LAAGITEVKV
RSVLTCATGT GVCAMCYGRS MATGKLVDIG EAVGIVAAQS IGEPGTQLTM RTFHQGGVTG
GADIVGGLPR VQELFEARIP RNRAPIADVS GRIRLEESDK FYKITIVPDD GGEEVVYDKL
SRRQRLKVFK HDDGSERLLT DGDHVEVGQQ LLEGSADPHE VLRVQGPREV QIHLVKEVQE
VYRAQGVSIH DKHIEVIVRQ MLRRVTIIDS GATEFLPGSL TERGEFETEN RRVVAEGGEP
AAGRPVLMGI TKASLATDSW LSAASFQETT RVLTDAAINC RSDKLQGLKE NVIIGKLIPA
GTGINRYRNI QVQPTEEARA AAYTIPSYED QYYSPDFGQA TGAAVPLDDY GYSDYR
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