Gene Mflv_5093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_5093 
Symbol 
ID4976404 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp5409976 
End bp5410728 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content67% 
IMG OID640459320 
Productendonuclease IV 
Protein accessionYP_001136347 
Protein GI145225669 
COG category[L] Replication, recombination and repair 
COG ID[COG0648] Endonuclease IV 
TIGRFAM ID[TIGR00587] apurinic endonuclease (APN1) 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.254368 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.214987 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGATCG GTTCCCATGT TCACGGCGAT GACCCCCTGG CCGCGGCAGA GGCGGACGGC 
GCTGACGTCG TCCAGTTCTT CCTCGGCAAT CCGCAGAGTT GGAAGAAGCC GCCGCCGCGG
GACGACGCCG ACGTGCTGAA AGCGGCTTCC ATGCCGATCT ACGTGCATGC TCCGTATCTG
ATCAACGTCG CCTCGGCGAA CAACCGGGTT CGGATCCCGT CGCGAAAGAT CCTGCAGGAC
ACCTGTGATG CTGCCTCGGA AATCGGCGCC ACCGCGGTGA TCGTGCACGG CGGACACGCC
GACGACAACG ACATGGACGC CGGCTTCGAG CGCTGGGTGA AGGCTCTGGC CAGCCTCAAG
ACCGACGTCC CCGTCTACCT GGAGAACACC GCGGGCGGCG ACCACGCGAT GGCCCGCCAC
TTCGACACGA TCGCGCGCCT GTGGGACCAC ATCGGCGACA TGGGCATCGG ATTCTGCCTC
GACACCTGCC ACGCCTGGGC CGCGGGAGAG GCGCTCGTCG ACGCGGTCGA ACGGATCAAG
GGCATCACGG GCCGCATCGA CCTCGTCCAC TGCAACGACT CACGCGACGC CGCCGGATCG
GGCGCGGACC GGCACGCCAA CTTCGGCACC GGTCAGATCG ATCCGCAACT GCTCGTCGCG
GTGGTCACCG CCGCGGGTGC GCCGGTGATC TGCGAGACGT CGGACGAAGG CCGCAAGGAC
GACATCGCGT TCCTGCGGGA GCACGTCAAC TAG
 
Protein sequence
MLIGSHVHGD DPLAAAEADG ADVVQFFLGN PQSWKKPPPR DDADVLKAAS MPIYVHAPYL 
INVASANNRV RIPSRKILQD TCDAASEIGA TAVIVHGGHA DDNDMDAGFE RWVKALASLK
TDVPVYLENT AGGDHAMARH FDTIARLWDH IGDMGIGFCL DTCHAWAAGE ALVDAVERIK
GITGRIDLVH CNDSRDAAGS GADRHANFGT GQIDPQLLVA VVTAAGAPVI CETSDEGRKD
DIAFLREHVN