Gene Mflv_5063 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_5063 
Symbol 
ID4976374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp5379452 
End bp5380006 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content71% 
IMG OID640459290 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001136317 
Protein GI145225639 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGCTG ATTCCGAGGG CGCGGCATCA GAGGGCGCGG TACCAGAGGG CTTAGACGCT 
CCCTCAGCAC TGCTCGCGCT GTATGACGAG GCTCTACCCG CCGTGTACGG GTACTTCGTC
AGGCGGTGCG GCGACCGGGG GACGGCCGAG GACCTCACGT CGGAGACCTT CCTGGCGGCG
ATGGACGCTG CGCGCAAACC GTCACCGCCG GACCTGTCGG TGCGGTGGCT CATCGGGGTG
GCCCGGCACA AGTTGGCCGA CCACTACCGG CGGCGCTGGG ACCGGTTCGC CACCCCGGTC
GCGGAGCTGC CCGAACCGGC GGACCCGGCC GACGAGTGGG ACGCCGAACT GGACCGGATC
GTCGCCGAGC AGGTGCTGAC CCGGCTGAGC GACCCGCACC GCGCCGTGCT GGTGCTGCGG
TACATGGACG GCTGCTCGGT GCCCGAATGC GCCGAGCTGA TCGGCCGCAC CGTGCACGCG
ACCGAGGCGT TGCTGGTGCG GGCGCGACGA GCGTTCCGCG CCATGTACCC CGAACCGGAA
GGAGGACTGT CATGA
 
Protein sequence
MSADSEGAAS EGAVPEGLDA PSALLALYDE ALPAVYGYFV RRCGDRGTAE DLTSETFLAA 
MDAARKPSPP DLSVRWLIGV ARHKLADHYR RRWDRFATPV AELPEPADPA DEWDAELDRI
VAEQVLTRLS DPHRAVLVLR YMDGCSVPEC AELIGRTVHA TEALLVRARR AFRAMYPEPE
GGLS