Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mflv_4971 |
Symbol | rpsD |
ID | 4976282 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium gilvum PYR-GCK |
Kingdom | Bacteria |
Replicon accession | NC_009338 |
Strand | - |
Start bp | 5292397 |
End bp | 5293002 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640459198 |
Product | 30S ribosomal protein S4 |
Protein accession | YP_001136225 |
Protein GI | 145225547 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0522] Ribosomal protein S4 and related proteins |
TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.557252 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTCGTT ATACCGGACC CGTCACCCGC AAGTCGCGTC GTCTCGGCGT CGACCTGGTC GGTGGAGATC AGTCCTTCGA GAAGCGCCCC TACCCGCCCG GCCAGCACGG CCGCGCGCGG ATCAAGGAGA GCGAATACCG CACCCAGCTG CAGGAGAAGC AGAAGGCCCG CTTCACCTAC GGCGTGATGG AGAAGCAGTT CCGTCGCTAC TACGAGGAGG CCAACCGCCT CCCCGGCAAG ACCGGTGACA ACCTGCTGCG CATCCTGGAA AGCCGGCTGG ACAACGTCGT GTACCGCGCC GGCCTGGCCC GGACCCGTCG CATGGCGCGC CAGCTGGTCA GCCACGGCCA CTTCACCGTC AACGGTGTGA AGGTCGACGT CCCCAGCTAC CGGGTGTCGC AGTACGACAT CATCGACGTC AAGGACAAGT CGATCAACAC GCTGCCCTTC GAGGTCGCCC GCCAGACTGC CGGCGAGCGT CCGATCCCGG GCTGGCTGCA GGTCGTCGGC GAGCGTCAGC GCATCCTCGT GCACCAGCTG CCCGAGCGCG CCCAGATCGA CGTGCCGCTC ACCGAGCAGC TCATCGTCGA GCTCTACTCG AAGTAG
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Protein sequence | MARYTGPVTR KSRRLGVDLV GGDQSFEKRP YPPGQHGRAR IKESEYRTQL QEKQKARFTY GVMEKQFRRY YEEANRLPGK TGDNLLRILE SRLDNVVYRA GLARTRRMAR QLVSHGHFTV NGVKVDVPSY RVSQYDIIDV KDKSINTLPF EVARQTAGER PIPGWLQVVG ERQRILVHQL PERAQIDVPL TEQLIVELYS K
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