| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_4912 |
|---|
| Symbol | |
|---|
| ID | 4976223 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium gilvum PYR-GCK |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009338 |
|---|
| Strand | - |
|---|
| Start bp | 5237784 |
|---|
| End bp | 5238368 |
|---|
| Gene Length | 585 bp |
|---|
| Protein Length | 194 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640459139 |
|---|
| Product | RNA polymerase sigma factor SigD |
|---|
| Protein accession | YP_001136166 |
|---|
| Protein GI | 145225488 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
|---|
| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.231025 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.668001 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAATTT CGGGAGAACG TCTCGATGCT GTCGTCGCTG AAGCGGTGGC AGGCGATCGG
GGCGCACTCC GGGAGGTGCT GGAGACCATC CGCCCCCTCG TCGTCCGGTA CTGCCGGGCG
AGGGTGGGGA CCGCGGAACG CAGTGGTCTT TCAGCTGATG ACGTAGCTCA GGAGGTGTGC
TTGGCCGCCA TAACGGCGCT GCCACGTTAC AGGGATCAGG GACGACCGTT TCTGGCCTTT
GTGTACGGCA TTGCAGCGCA TAAGGTTGCT GACGCGCACC GGGCAGCTGG TCGCAACCGG
GCCGATCCGA TGGATGTGGT CCCGGAGCGA CTCTCCGGTG AAGCCGGCCC CGAGCAGATG
GCGATCGATT CCGAATCGTC GGCCCGGATG GCGACGCTGC TGAAGGTGTT GCCCGAGAAG
CAGCGCGAGA TCCTGATCCT GCGCGTCGTC GTCGGCATGA GCGCCGAAGA GACCGCGGAG
GCGGTCGGCA GCACCGCCGG TGCCGTGCGC GTCGCCCAGC ATCGGGCGCT GTCGCGGCTG
AAGGCCGAGA TCACTTCGAC GGGGCAGGGG CGCGACTATG CCTGA
|
|---|
| Protein sequence | MTISGERLDA VVAEAVAGDR GALREVLETI RPLVVRYCRA RVGTAERSGL SADDVAQEVC
LAAITALPRY RDQGRPFLAF VYGIAAHKVA DAHRAAGRNR ADPMDVVPER LSGEAGPEQM
AIDSESSARM ATLLKVLPEK QREILILRVV VGMSAEETAE AVGSTAGAVR VAQHRALSRL
KAEITSTGQG RDYA
|
|---|
| |