Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mflv_4893 |
Symbol | dnaE2 |
ID | 4976204 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium gilvum PYR-GCK |
Kingdom | Bacteria |
Replicon accession | NC_009338 |
Strand | - |
Start bp | 5212620 |
End bp | 5215883 |
Gene Length | 3264 bp |
Protein Length | 1087 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640459120 |
Product | error-prone DNA polymerase |
Protein accession | YP_001136147 |
Protein GI | 145225469 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0587] DNA polymerase III, alpha subunit |
TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0740584 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTCGCG TCCTCGAAGG CAAGCCCCGT CGCGCCGGTT GGCCCATCGA CGCACAGGTC GGCGACGGCG GGGACAGTCC AGCCTGGTCG AGCAAGCGGG GGCAGTACCG GGCGCCGGAG TCGAGGGGCC CCGCGACGGG GCGTTCGATG CCCTACGCCG AGCTACACGC CCACTCGGCC TACAGCTTTC TCGATGGTGC GAGCACTCCC GAGGAACTGG TGGAGGAGGC GTCCCGGCTG GGCCTGCGGG CCCTCGCGCT GACCGACCAC GACGGGCTCT ACGGTGTGGT GCGCTTCGCC GAAGCGGCCA AGGAGCTCGA CGTGGACACG GTCTTCGGTG CAGAACTGTC CCTCGGTGGG GGAACCCGCA CCGACGTCCC CGACCCGCCC GGCCCGCACC TGCTGGTGCT CGCCCGCGGG CCGGAGGGCT ACCGGCGACT GTCGCGGCAG CTGGCTGCGG CGCATCTGGC CGGTGGCGAG AAAGGGGTGC TGCGCTATGA CTTCGACGCG TTGACGGAGG CCGCGGGCGG GCACTGGCAG ATCCTCACCG GATGTCGCAA GGGTCATGTC CGCCAGGCGC TGTTGCGTGG AGGCGACAGT GCTGCCGAGG CCGCGCTGGC CGATCTGGTG GATCGGTTCG GCCGCGAGCG GGTCACTGTC GAGCTCACCC ACCACGGCCA TCCGCTCGAC GACGAACGCA ATGCCGCACT GGCCGCGCTG GCGCCGCGGT TCGGCCTCAC CGTCATCGCC ACCACCGCCG CGCATTTCGC CGAACCGTCC CGGGGCAGGC TCGCGATGGC GATGGGGGCG ATCCGGGCCC GGAACTCGAT CGACGAAGCA GCGGGTTACC TTGCCCCGCT CGGCGGGTCG CATCTGCGGT CGGGGGAGGA GATGGCACGG GTGTTCGCCC ACTGCCCCGA GGTGGTGACG GCCGCCGCCG ATCTCGGTGA ACAGTGCGCG TTCGGCCTTG CGCTGATCGC TCCACAGCTG CCGCCGTTCG AGGTCCCGGC GGGGCACACC GAGAACAGCT GGTTACGGCA CCTGGTGATG CAGGGCGCCC GCGAACGCTA CGGCCCGCCC GAGCGCGCGT CGCGCGCCTA CGCCCAGATC GAGCACGAGC TGCGGGTCAT CGAGCAATTG AATTTTCCGG GTTATTTCCT TGTGGTGCAC GACATCACCC GGTTCTGCCG GGAGAACGCG ATCCTGTCCC AGGGTCGGGG GTCGGCGGCC AACTCGGCGG TCTGCTACGC CCTCAAGGTC ACCAACGTCG ACCCGATCGC CAACGGGTTG TTGTTCGAAC GCTTCCTGTC CCCGGCCCGC GACGGGCCAC CCGACATCGA CATCGACATC GAATCCGACC TGCGCGAGAA GGCGATCCAG TACGTCTACG AACGCTATGG GCGCGAGTAC GCCGCCCAGG TGGCCAACGT GATCACCTAC CGGGGACGCA GCGCGGTGCG CGACATGGCC CGCGCGCTGG GATTCTCGCA GGGGCAGCAG GATGCCTGGA GCAAGCAGAT CAGCCAGTGG GGCAACCTGG CCGACGCCAC CCATGTCGAG GACATCCCGG AGCCCGTGAT CGACCTGGCC ATGCAGATCT CCCACCTGCC CCGGCACATG GGAATCCACT CCGGCGGCAT GGTGATCTGC GACCGCCCGA TCGCCGACGT GTGTCCGGTC GAGTGGGCGC GGATGGAGAA CCGCAGCGTC CTGCAGTGGG ACAAAGACGA CTGTGCCGCA ATCGGTTTGG TCAAGTTCGA TCTGCTGGGG CTCGGTATGC TCTCGGCACT GCACTACGCG ATCGACCTGG TGGCCGAGCA CAAAGGCCTT GAGGTGGACC TGGCCAAGCT CGACCTCTCG GAACCGGCGG TGTACGAGAT GCTGCAGCGG GCCGACTCCG TCGGGGTGTT CCAGGTGGAA TCCCGGGCGC AGATGGCGAC CCTGCCCCGG CTCAAGCCCC GGATGTTCTA CGACCTGGTG GTCGAGGTCG CGCTGATCCG GCCCGGCCCC ATCCAGGGTG GCTCGGTGCA TCCCTACATC AAGCGGCGCA ACGGTCAGGA GCCGGTCACC TACGAGCATC CCTCGATGGA GCGGGCACTG CGAAAAACGT TGGGGGTGCC GCTGTTCCAG GAGCAGTTGA TGCAGCTGGC GGTCGACTGC GCGGGCTTCT CGGCGGCCGA GGCCGACCAG CTGCGCAGGG CGATGGGCTC CAAGCGCTCG ACGGAGAAGA TGCGCCGGCT GCGCGGACGG TTCTTCGAGG GCATGGCCGA ACTGCACGGC ATCAGCGGAG ACGTCGCGCG CAGGATCTAC GAGAAGCTGG AGGCCTTCGC GAATTTCGGC TTCCCCGAGA GTCATTCGCT GAGCTTCGCG TCGCTGGTGT TCTACTCCTC GTGGTTCAAG TTGCACCATC CCGCGGCGTT CTGCGCCGCA CTGCTGCGCG CGCAGCCGAT GGGCTTCTAC TCACCGCAGA CGCTGGTCGC CGACGCCCGC AGGCACGGCG TCGACGTGCA CGGGCCGGAC GTGAACGCCA GCCTCGCGCA CGCCACGCTG GAGAACCACG GACTCGACGT GCGACTCGGT CTCGGCAGCA TCCGCCACAT CGGCGACGAG CTGGCGCAAC GTCTGGTGGA GGACCGAAAG CTCAACGGCC CCTTCGTTTC TCTGACCGAT CTGACCAGGC GGGTGCAGCT GACGGTCCCG CAGACCGAGG CGCTGGCGAC CGCGGGTGCA CTGGGATGCT TCGGGATCAC CCGGCGGGAG GGTCTGTGGG CGGCGGGCGC GGCTGCCACC GAACGGCCGG ATCGGCTCCC GGGGGTGGGT TCGTCCTCGC AGGTGCCGTC CCTGCCCGGC ATGACGGAAC TGGAGCTGAC GGCCGCGGAC GTGTGGGCGA CCGGGGTGTC CCCGGACCGC TACCCGACGG AGTTCCTGCG TGAAGACCTC GACGCGATGG GCGTGGTGCC CGCCGACCGG CTGTTGTCGG TGCGCGACGG CACCCGGGTG CTGGTGGCGG GGGCGGTGAC GCACCGGCAG CGGCCCGCCA CCGCACAGGG GGTGACGTTC CTGAACCTCG AAGACGAGAC CGGTATGGTC AATGTGCTCT GCTCCCAAGG CATCTGGGCC CGGCACCGCA AACTGGCGCA GACCGCGTCG GCGCTGGTGG TCCGCGGCAT CGTGCAGAAC GCCACCGGGG CCGTCACGGT GGTCGCCGAC AGGATGGGCC CGATCAACAT GAAGGTCGCG TCGAAGTCGC GCGACTTCCG CTGA
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Protein sequence | MRRVLEGKPR RAGWPIDAQV GDGGDSPAWS SKRGQYRAPE SRGPATGRSM PYAELHAHSA YSFLDGASTP EELVEEASRL GLRALALTDH DGLYGVVRFA EAAKELDVDT VFGAELSLGG GTRTDVPDPP GPHLLVLARG PEGYRRLSRQ LAAAHLAGGE KGVLRYDFDA LTEAAGGHWQ ILTGCRKGHV RQALLRGGDS AAEAALADLV DRFGRERVTV ELTHHGHPLD DERNAALAAL APRFGLTVIA TTAAHFAEPS RGRLAMAMGA IRARNSIDEA AGYLAPLGGS HLRSGEEMAR VFAHCPEVVT AAADLGEQCA FGLALIAPQL PPFEVPAGHT ENSWLRHLVM QGARERYGPP ERASRAYAQI EHELRVIEQL NFPGYFLVVH DITRFCRENA ILSQGRGSAA NSAVCYALKV TNVDPIANGL LFERFLSPAR DGPPDIDIDI ESDLREKAIQ YVYERYGREY AAQVANVITY RGRSAVRDMA RALGFSQGQQ DAWSKQISQW GNLADATHVE DIPEPVIDLA MQISHLPRHM GIHSGGMVIC DRPIADVCPV EWARMENRSV LQWDKDDCAA IGLVKFDLLG LGMLSALHYA IDLVAEHKGL EVDLAKLDLS EPAVYEMLQR ADSVGVFQVE SRAQMATLPR LKPRMFYDLV VEVALIRPGP IQGGSVHPYI KRRNGQEPVT YEHPSMERAL RKTLGVPLFQ EQLMQLAVDC AGFSAAEADQ LRRAMGSKRS TEKMRRLRGR FFEGMAELHG ISGDVARRIY EKLEAFANFG FPESHSLSFA SLVFYSSWFK LHHPAAFCAA LLRAQPMGFY SPQTLVADAR RHGVDVHGPD VNASLAHATL ENHGLDVRLG LGSIRHIGDE LAQRLVEDRK LNGPFVSLTD LTRRVQLTVP QTEALATAGA LGCFGITRRE GLWAAGAAAT ERPDRLPGVG SSSQVPSLPG MTELELTAAD VWATGVSPDR YPTEFLREDL DAMGVVPADR LLSVRDGTRV LVAGAVTHRQ RPATAQGVTF LNLEDETGMV NVLCSQGIWA RHRKLAQTAS ALVVRGIVQN ATGAVTVVAD RMGPINMKVA SKSRDFR
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