| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_4869 |
|---|
| Symbol | |
|---|
| ID | 4976180 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium gilvum PYR-GCK |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009338 |
|---|
| Strand | + |
|---|
| Start bp | 5188414 |
|---|
| End bp | 5189637 |
|---|
| Gene Length | 1224 bp |
|---|
| Protein Length | 407 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640459096 |
|---|
| Product | Serine-type D-Ala-D-Ala carboxypeptidase |
|---|
| Protein accession | YP_001136123 |
|---|
| Protein GI | 145225445 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.253458 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.168548 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGACCT TACGCACCAC CCTGCTGCGC GCATCCGCGC TGGTCACAGC TTCGATGCTG
GCACTGGCGC CGGCCGCTGC CGCCCAACCG GCGCCCGCAG CCGACCCGTG CCCCTACCGG
GTCACCACCC CACCCGCCGT CGACGCATCC GAGGTCCCCA AGCCGGGCGA CCCGACACCC
GGCCCGCTTC CCGTGCCCGC CAAACCGATG GGCGGCGACG CGCTGTCGGG ATGCGGTGTC
ATCACGGCAC CGGGCACCCC GCCGGTCCCG GGCGACGTGT CCGCCGAGGC ATGGCTCGTC
GCCGACCTCG ACAGCGGAGA CGTCATCGCC GCCCGCGATC CGCACGGCAG GCACCGCCCC
GCCAGCATCA TCAAGGTGCT GACCGCGATG CAGGCGCTGC GGGACCTCCC GCTGATGAAG
ACGGTGCCCG GCACCCCCGA GGACGCCGCG CAGGAAGGCA CCAAGGTCGG CGTCGGCGAA
GGCGGCGTGT ACACGGTCAA CGACCTGCTG CACGGCCTGC TGATGTACTC CGGCAACGAC
GCCGCACACG CGCTGGCCAT GCAGATGGGC GGTATGGACA CCGCGCTGAA CAAGATCAAC
GTGCTGGCCC AGAAGCTGGG CGCCCGCGAC ACCCGCGTGG CGACCCCGTC GGGTCTCGAC
GGTCCGGGCA TGAGCACGTC GGTCTATGAC ATGGGCCTGT TCTACCGGTA CGCGTGGCAC
AACCCGGTGT TCGCCGACAT CGTCGCGACC CGCGCCACCC AGTTCCCCGG ACGCGAGGGT
GCCGGCTACC CGATCGAGAA CGACAACAAG CTGCTCGCGA ACTACCCCGG CGCGCTCGGC
GGCAAGACCG GCTACACCGA CGACGCCGGA CAGACGTTCG TCGGCGCCGC CGAACGCGAC
GGCCGCCGCC TGGTCGCGGT GCTGATGCGC GGGACGCGGC AGCCGATCGC GCCGTGGGAA
CAGGCCGCGC GCCTGCTCGA CTACGGTTTC GCGACCGCGC CGGGCACCAA GGTGGGCACC
CTGATCGAAC CCGACCCGTC GCTCGGCGTC GACCGGGCCG ACCCCGCCGT GGCGGCCCTG
ACCAAGACGA ACGCCAACGC CAACGCGGTG CTGCCCGACG TCGACGCGAT GCCGGTACGG
ATCGGTGTCG GCGTGATCGG TGCGGTCATC GTGCTGACGC TGATCATGGG CGCCCGCGCG
CTGAACAGCC GTCCGGCGCG TTAG
|
|---|
| Protein sequence | MATLRTTLLR ASALVTASML ALAPAAAAQP APAADPCPYR VTTPPAVDAS EVPKPGDPTP
GPLPVPAKPM GGDALSGCGV ITAPGTPPVP GDVSAEAWLV ADLDSGDVIA ARDPHGRHRP
ASIIKVLTAM QALRDLPLMK TVPGTPEDAA QEGTKVGVGE GGVYTVNDLL HGLLMYSGND
AAHALAMQMG GMDTALNKIN VLAQKLGARD TRVATPSGLD GPGMSTSVYD MGLFYRYAWH
NPVFADIVAT RATQFPGREG AGYPIENDNK LLANYPGALG GKTGYTDDAG QTFVGAAERD
GRRLVAVLMR GTRQPIAPWE QAARLLDYGF ATAPGTKVGT LIEPDPSLGV DRADPAVAAL
TKTNANANAV LPDVDAMPVR IGVGVIGAVI VLTLIMGARA LNSRPAR
|
|---|
| |