Gene Mflv_4783 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_4783 
Symbol 
ID4976095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp5094441 
End bp5095607 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content68% 
IMG OID640459012 
Productdiguanylate cyclase 
Protein accessionYP_001136039 
Protein GI145225361 
COG category[T] Signal transduction mechanisms 
COG ID[COG2199] FOG: GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.49598 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCACGGC AACTTTCGGT CGTCGCGGGT CTGCGTCACT GGTGGCGCCA AGCCGACCAC 
TACGACTGGT TCGCCGACTA CCTCAGCGCA CGGGGACTGG TCGGTCTGGC CCGGGTGATC
ACGGCCGTCA CCGCGGCAGG ACTGGCACTC GTCGGAGCCA CGGTGATGTT CTGCCCCGGC
GGACCGACGG GCACCCTCGA CGTAACCCTC GGATGGGCCG CGGTCGCCCT GGCCTTCGGC
TGCGCGATCG TGCGGTGGTC GATCTGGCCG TCGAAACGCC AGTCGGTCGT GCTGATCCTG
GCGCTGAACC TGGCCATCGC CCTCTTCTGT CAGGTCCAGA CCGATCAACT CATCGGCGTG
GTCGGAGCGA CGGCGTTCGC CACCACGGGC ATCTCCATCG CCTGTCTGCA CAGCGCCAAA
TACATGCTCT ACAACGTCGT CGTGGCCGCC TACATCGGCG GACTGCAGGC CGTGCGCGCG
ATGGACGAGA CCGACGGCCA CCTGATCCTC GCCGCCCTCG GGCTGGTGCT GATCATCAAC
ATCAGCGTCC CGTTCTCGGT GCAGTCGCTC GTCCACGCCC TCGGCGGCGA CGTGGTCCAG
TCCGACCGCG ACCCCCTGAC CGGGCTGTGT CACCGGCGCG CACTGTTCCG TCAGCTCAAC
GCCCTGCTGC TGTCACACCG CGAGCACGCC GACTTCCTGG CCGTGACGAT GATCGACCTC
GACAAGTTCA AGGTGCTCAA CGACACCTAC GGCCACAGCG CCGGCGACGA CGCGCTGGTC
GCCGTCGGGG AGGCACTCCT GACCGCCGCC AACGGCAGAG CGCTCGTCGG CAGGGTCGGC
GGCGAGGAGT TCATGGTCGC CGAACTCTGC GAGACCGCCC GCGACACCGG CCTGTCCGAA
CGCCTCCGCG CCGCCATCGC CGCACTGCCA CACCACATCA CCGGCAGCGT CGGCACCGCG
GTCGCGTCGA TCAACGATGT GCCCACCGAC GATTTCCAGG ACCTCGTCGT CACGCTGTTC
CGACGCTCCG ACCGCGCCAT GTACGAGGCC AAGCGCGCCG GCGGCAACCA GATCCGGCAC
ACCGTGATCG ATCTACCAGC GATCCCGGTG AGCGGGGCGG ACAACTTACC GGCGGGTAAC
CGACCGGCCC GCCGCACCTC GGATTGA
 
Protein sequence
MPRQLSVVAG LRHWWRQADH YDWFADYLSA RGLVGLARVI TAVTAAGLAL VGATVMFCPG 
GPTGTLDVTL GWAAVALAFG CAIVRWSIWP SKRQSVVLIL ALNLAIALFC QVQTDQLIGV
VGATAFATTG ISIACLHSAK YMLYNVVVAA YIGGLQAVRA MDETDGHLIL AALGLVLIIN
ISVPFSVQSL VHALGGDVVQ SDRDPLTGLC HRRALFRQLN ALLLSHREHA DFLAVTMIDL
DKFKVLNDTY GHSAGDDALV AVGEALLTAA NGRALVGRVG GEEFMVAELC ETARDTGLSE
RLRAAIAALP HHITGSVGTA VASINDVPTD DFQDLVVTLF RRSDRAMYEA KRAGGNQIRH
TVIDLPAIPV SGADNLPAGN RPARRTSD