| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_4710 |
|---|
| Symbol | |
|---|
| ID | 4976022 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium gilvum PYR-GCK |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009338 |
|---|
| Strand | - |
|---|
| Start bp | 5018137 |
|---|
| End bp | 5019897 |
|---|
| Gene Length | 1761 bp |
|---|
| Protein Length | 586 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640458939 |
|---|
| Product | lipoprotein LpqB |
|---|
| Protein accession | YP_001135966 |
|---|
| Protein GI | 145225288 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.00808733 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGACGCGCA CGCGCTTCGC CGCACTGGTG ACGGCGCTGG TGCTCGCCGT GGCTGGCTGT
GCGGGAGTCC CGACGTCGTC GTCCCCGCAG GCCATCGGCA CCGTGGACCG TCCGGCACCG
CCGAGCCTGC CGACACCGAC GCCCGGGATG GACCCCGACG TCCTGTTACG CGAATTCCTC
AAGGCCACTG CCGATCCCTC GAACCGGCAC CTCGCCGCGC GGCAGTTCCT GACCGAATCG
GCGTCCAGTA CCTGGGACGA CGCCGGCAGC GCGCTGCTCA TCGACAACGT CGTGTTCGTC
GAAACCCGGA CCCCCGAACG GGTTTCGGTG ACGATGCGCG CCGACATCCT CGGATCCCTC
TCGGACATGG GCGTTTTCGA GACCGGCGCG GGCGCGCTAC CCGACCCGGG CCCGATCGAG
CTCGTCAAGA CGGCAGGCGG ATGGCGTATC GACCGTCTGC CCAACGGCGT CTTCCTGGAC
TGGCAGCAGT TCCAGGCCAC CTACAAGCGG CACACCCTGT ACTTCGCCGA CCCGACCGGC
AAGACCGTGG TGCCCGACCC GCGCTACGTC GCGGTGTCCG AACCGGACCA ACTGGCCACC
GAACTGGTCA GCAAGCTGAT CACCGGGCCT CGGCCCGAGA TGGACAAGAC GGTGCGCAAC
CTGCTGGGTT CGCCGCTGCG GCTGCGCGGC CCGGTCACCC GCGCCGACGG CGGCAAGACC
GGGATCGGCC GGGGCTACGG CGGAGCGCGC ATCGACCTGG AGAACCTGTC GACGACCGAC
CCGCACAGCA GACAACTGCT TGCCGCCCAA CTCATCTGGA CGCTGTCCCG CTCGGGCATC
AACGGCCCGT ACGTGATCAA CGCCGACGGC GCCGCCCTCG ACGACCGGTT CGCCCAAGGC
TGGGACACCG GCGCGGTGGC GGCCACCGAC CCGGGAGCCG CCGACGGTGC GGCCGCAGGT
CTGCACGCGC TCGTCGGCGG AACCCTGGTC CGCCTCGACG GAGACCGCGC ACCGCGGGTC
GCGGGTCCGT TCGGGCAGAT GCCGGGACAG ACCGGCGCGG CGTTGTCGCG GTCCGGCCAG
GAGGTCGCCT CGGTCGTCAC GATGCGGCCC GGCGCGCCCG ACATGGCCTC GTCGCTGTGG
GTGGGTCCGC TGGGCGGCAA CGCCGCACAG GTGATGGACG GCCGCAGCCT GACCCGGCCC
AGCTGGTCGC TCGACGACGC GATCTGGGTC GTCGTCGACG GCAACAACGT CGTGCGCGTC
ATCCAGGACG CGTCGGGGCA ACCCGCCCGC ATCCCCGTCG ACGCGACGGC GGTGCTGACG
CGGTTCCCCG GAGGCATCGC CGAGCTGCAG CTCTCCCGCG ACGGCACCCG CGCGGCGATG
GTGATCGGCG GCAAGGTGAT CCTGGCCGGC GTCGAGCAGA CACCCGGGGG AGGGTATGCG
CTGACCTATC CGCGCCGGCT CGGCTATGGA CTCGGTGAGA ACGCGCTGTC GCTGTCCTGG
CGCACCGGCG ACGACATCGT CGTCACCCGC ACCGATCCCC AGCATCCGGT GTCCTACGTC
AACCTCGACG GCGTCGACTC CGACGGCCCG AGCCGCAACC TGCTGATGCC CGTGCGGTCG
GTCGCGGCGA ACCCGTCGGC GGTCTACGTG TCCGACGGGC GCGGCGTGCT GCAGCTGTCC
GGCTCGGCGG CCGAGGACCC GTCGTGGGTC GAGGTGCGGC CGCTGATGGT GGCCGGCGCC
CTGCCCGTGC TGCCCGGCTG A
|
|---|
| Protein sequence | MTRTRFAALV TALVLAVAGC AGVPTSSSPQ AIGTVDRPAP PSLPTPTPGM DPDVLLREFL
KATADPSNRH LAARQFLTES ASSTWDDAGS ALLIDNVVFV ETRTPERVSV TMRADILGSL
SDMGVFETGA GALPDPGPIE LVKTAGGWRI DRLPNGVFLD WQQFQATYKR HTLYFADPTG
KTVVPDPRYV AVSEPDQLAT ELVSKLITGP RPEMDKTVRN LLGSPLRLRG PVTRADGGKT
GIGRGYGGAR IDLENLSTTD PHSRQLLAAQ LIWTLSRSGI NGPYVINADG AALDDRFAQG
WDTGAVAATD PGAADGAAAG LHALVGGTLV RLDGDRAPRV AGPFGQMPGQ TGAALSRSGQ
EVASVVTMRP GAPDMASSLW VGPLGGNAAQ VMDGRSLTRP SWSLDDAIWV VVDGNNVVRV
IQDASGQPAR IPVDATAVLT RFPGGIAELQ LSRDGTRAAM VIGGKVILAG VEQTPGGGYA
LTYPRRLGYG LGENALSLSW RTGDDIVVTR TDPQHPVSYV NLDGVDSDGP SRNLLMPVRS
VAANPSAVYV SDGRGVLQLS GSAAEDPSWV EVRPLMVAGA LPVLPG
|
|---|
| |