Gene Mflv_4706 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_4706 
Symbol 
ID4976018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp5015047 
End bp5015757 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content64% 
IMG OID640458935 
Productsigma 54 modulation protein/ribosomal protein S30EA 
Protein accessionYP_001135962 
Protein GI145225284 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1544] Ribosome-associated protein Y (PSrp-1) 
TIGRFAM ID[TIGR00741] ribosomal subunit interface protein 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00952924 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGAAAGA GAATCGAGTT GCCAAGTATG TCAAGTAATT CCGTGGACTC CGACAGCACG 
ATGGTCATGG ACGGGGAACA GCACGACGCC CAATCGTCCG ACCTGCCCAG CGCTGAGGTG
GTGGTCAAGG GTCGCAACGT CGAAGTTCCC GACCACTTCC GCCTCTACGT CGCCGAGAAG
CTGGCACGCC TGGAACGATT CGACCGCACC ATCTACCTCT TCGACGTCGA GCTCGATCAC
GAGAAGAACC GGCGTCAACG CAAGAACTGC CAGCACGTCG AGATCACCGC GCGGGGCCGC
GGCCCCGTCG TTCGAGGGGA AGCCTGCGCC GACAGTTTCT ACGGCGCCTT CGAAGCCGCT
GCGAGCAAAC TCGAAGCCCG GCTGCGCAAG AGCAAGGACC GCCGCAAGAT CCACTACGGC
GACAAGACCC CGGTGTCACT GCACGAGGCG ACGGCTCTGG ACCGTCTCGA CGCCGCGTTC
GCCAAGCCGA CGGAGACATC TGCGGTCGAG GCGCCCGTCG ACGACCACGA ACCGGGCCGG
ATCGTGCGGA CCAAGGAGCA TCCCGCGACG CCGATGACCG TCGACGATGC GCTCTACGAG
ATGGAACTGG TCGGCCACGA CTTCTTCCTG TTCCACGACA AGGAGAGCGA TCGCCCCTGC
GTGGTCTACC GCCGGCACGC CTACGACTAC GGATTGATCA AGCTCGCCTG A
 
Protein sequence
MRKRIELPSM SSNSVDSDST MVMDGEQHDA QSSDLPSAEV VVKGRNVEVP DHFRLYVAEK 
LARLERFDRT IYLFDVELDH EKNRRQRKNC QHVEITARGR GPVVRGEACA DSFYGAFEAA
ASKLEARLRK SKDRRKIHYG DKTPVSLHEA TALDRLDAAF AKPTETSAVE APVDDHEPGR
IVRTKEHPAT PMTVDDALYE MELVGHDFFL FHDKESDRPC VVYRRHAYDY GLIKLA