Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mflv_4706 |
Symbol | |
ID | 4976018 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium gilvum PYR-GCK |
Kingdom | Bacteria |
Replicon accession | NC_009338 |
Strand | - |
Start bp | 5015047 |
End bp | 5015757 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640458935 |
Product | sigma 54 modulation protein/ribosomal protein S30EA |
Protein accession | YP_001135962 |
Protein GI | 145225284 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1544] Ribosome-associated protein Y (PSrp-1) |
TIGRFAM ID | [TIGR00741] ribosomal subunit interface protein |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00952924 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGAAAGA GAATCGAGTT GCCAAGTATG TCAAGTAATT CCGTGGACTC CGACAGCACG ATGGTCATGG ACGGGGAACA GCACGACGCC CAATCGTCCG ACCTGCCCAG CGCTGAGGTG GTGGTCAAGG GTCGCAACGT CGAAGTTCCC GACCACTTCC GCCTCTACGT CGCCGAGAAG CTGGCACGCC TGGAACGATT CGACCGCACC ATCTACCTCT TCGACGTCGA GCTCGATCAC GAGAAGAACC GGCGTCAACG CAAGAACTGC CAGCACGTCG AGATCACCGC GCGGGGCCGC GGCCCCGTCG TTCGAGGGGA AGCCTGCGCC GACAGTTTCT ACGGCGCCTT CGAAGCCGCT GCGAGCAAAC TCGAAGCCCG GCTGCGCAAG AGCAAGGACC GCCGCAAGAT CCACTACGGC GACAAGACCC CGGTGTCACT GCACGAGGCG ACGGCTCTGG ACCGTCTCGA CGCCGCGTTC GCCAAGCCGA CGGAGACATC TGCGGTCGAG GCGCCCGTCG ACGACCACGA ACCGGGCCGG ATCGTGCGGA CCAAGGAGCA TCCCGCGACG CCGATGACCG TCGACGATGC GCTCTACGAG ATGGAACTGG TCGGCCACGA CTTCTTCCTG TTCCACGACA AGGAGAGCGA TCGCCCCTGC GTGGTCTACC GCCGGCACGC CTACGACTAC GGATTGATCA AGCTCGCCTG A
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Protein sequence | MRKRIELPSM SSNSVDSDST MVMDGEQHDA QSSDLPSAEV VVKGRNVEVP DHFRLYVAEK LARLERFDRT IYLFDVELDH EKNRRQRKNC QHVEITARGR GPVVRGEACA DSFYGAFEAA ASKLEARLRK SKDRRKIHYG DKTPVSLHEA TALDRLDAAF AKPTETSAVE APVDDHEPGR IVRTKEHPAT PMTVDDALYE MELVGHDFFL FHDKESDRPC VVYRRHAYDY GLIKLA
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