Gene Mflv_4689 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_4689 
Symbol 
ID4976001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp4995380 
End bp4996138 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content67% 
IMG OID640458918 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001135945 
Protein GI145225267 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02947] RNA polymerase sigma-70 factor, TIGR02947 family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0439737 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0420679 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGCCAG TGATGGCCAT GAAAGCCCCG TCGCGTTCGG TGTTCGTGCT GGACGTGATC 
GGCGGCGCCG CTACAGAAGG GACGGTGTTC CCCACGATGA CCGACACCAA CGGGCTGGCC
GCCTCACCCG CGCCGGCCGA CGCGGGCGAG GCGCGGGAGG AGACCGACGC CGAGCTGACC
GCGCGATTCG AGCGTGACGC CATACCGCTG CTCGACCAGC TCTACGGCGG CGCGCTGCGG
ATGACGCGCA ATCCGGCCGA CGCCGAGGAC CTGCTCCAGG AGACGATGGT CAAGGCCTAT
TCGGGGTTCC GTTCGTTCCG GGAGGGAACC AACCTCAAGG CGTGGCTGTA CCGGATCCTG
ACGAACACCT ACATCAACAG CTATCGCAAG AAGCAGCGTC AGCCTGCGGA GTATCCGACC
GAGGAGATCA CCGACTGGCA GCTGGCCGCC AACGCCGAGC ACACCTCGAC GGGGCTTCGC
TCGGCCGAGG TCGAGGCGCT CGAGCTGCTT CCCGACAGCG AGATCAAGGA AGCTCTGCAG
GCGCTGCCGG AAGACTTCCG GATGGCGGTG TACTACGCCG ACGTCGAGGG CTTCCCGTAC
AAGGAGATCG CCGAGATCAT GGAGACGCCG ATCGGCACGG TGATGTCGCG TCTGCATCGC
GGGAGACGCC AGCTGCGCGA ACTGCTGGCG GGGGTCGCCC GGGATCGCGG ATTCATTCGC
GGCGAGCAGC TTGAGGCACC CGAGGAGGTC ACGTCATGA
 
Protein sequence
MVPVMAMKAP SRSVFVLDVI GGAATEGTVF PTMTDTNGLA ASPAPADAGE AREETDAELT 
ARFERDAIPL LDQLYGGALR MTRNPADAED LLQETMVKAY SGFRSFREGT NLKAWLYRIL
TNTYINSYRK KQRQPAEYPT EEITDWQLAA NAEHTSTGLR SAEVEALELL PDSEIKEALQ
ALPEDFRMAV YYADVEGFPY KEIAEIMETP IGTVMSRLHR GRRQLRELLA GVARDRGFIR
GEQLEAPEEV TS