Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mflv_4689 |
Symbol | |
ID | 4976001 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium gilvum PYR-GCK |
Kingdom | Bacteria |
Replicon accession | NC_009338 |
Strand | - |
Start bp | 4995380 |
End bp | 4996138 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640458918 |
Product | ECF subfamily RNA polymerase sigma-24 factor |
Protein accession | YP_001135945 |
Protein GI | 145225267 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family [TIGR02947] RNA polymerase sigma-70 factor, TIGR02947 family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0439737 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0420679 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGCCAG TGATGGCCAT GAAAGCCCCG TCGCGTTCGG TGTTCGTGCT GGACGTGATC GGCGGCGCCG CTACAGAAGG GACGGTGTTC CCCACGATGA CCGACACCAA CGGGCTGGCC GCCTCACCCG CGCCGGCCGA CGCGGGCGAG GCGCGGGAGG AGACCGACGC CGAGCTGACC GCGCGATTCG AGCGTGACGC CATACCGCTG CTCGACCAGC TCTACGGCGG CGCGCTGCGG ATGACGCGCA ATCCGGCCGA CGCCGAGGAC CTGCTCCAGG AGACGATGGT CAAGGCCTAT TCGGGGTTCC GTTCGTTCCG GGAGGGAACC AACCTCAAGG CGTGGCTGTA CCGGATCCTG ACGAACACCT ACATCAACAG CTATCGCAAG AAGCAGCGTC AGCCTGCGGA GTATCCGACC GAGGAGATCA CCGACTGGCA GCTGGCCGCC AACGCCGAGC ACACCTCGAC GGGGCTTCGC TCGGCCGAGG TCGAGGCGCT CGAGCTGCTT CCCGACAGCG AGATCAAGGA AGCTCTGCAG GCGCTGCCGG AAGACTTCCG GATGGCGGTG TACTACGCCG ACGTCGAGGG CTTCCCGTAC AAGGAGATCG CCGAGATCAT GGAGACGCCG ATCGGCACGG TGATGTCGCG TCTGCATCGC GGGAGACGCC AGCTGCGCGA ACTGCTGGCG GGGGTCGCCC GGGATCGCGG ATTCATTCGC GGCGAGCAGC TTGAGGCACC CGAGGAGGTC ACGTCATGA
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Protein sequence | MVPVMAMKAP SRSVFVLDVI GGAATEGTVF PTMTDTNGLA ASPAPADAGE AREETDAELT ARFERDAIPL LDQLYGGALR MTRNPADAED LLQETMVKAY SGFRSFREGT NLKAWLYRIL TNTYINSYRK KQRQPAEYPT EEITDWQLAA NAEHTSTGLR SAEVEALELL PDSEIKEALQ ALPEDFRMAV YYADVEGFPY KEIAEIMETP IGTVMSRLHR GRRQLRELLA GVARDRGFIR GEQLEAPEEV TS
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