Gene Mflv_4578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_4578 
Symbol 
ID4975890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp4872160 
End bp4873173 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content65% 
IMG OID640458806 
ProductABC sugar transporter, periplasmic ligand binding protein 
Protein accessionYP_001135834 
Protein GI145225156 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1879] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.305555 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCGCA GTCGAACTGC CCTTCTCGGT GCGGTGGGCG TGACCATGTC GCTGGTCGCC 
GCGTCCGCGG GCGCCGCCAA CGCCTCCCCG GATGCCGGCG ACGTGACGAT GGTCAACGTC
GTCAAGGTCG AAGGCATCCC CTGGTTCAAC CGAATGGCGG TGGGCGTCGA GAACTTTGCG
AGTCGCACCG GCGTCCACGC GAGCCAGGTG GGCGCAGACG ACACCAGCGC GCAGAAGCAG
GTTCAGCTCA TCGCGGACCT GATCCCTCGC CGCCCCACCG CCATCACCGT GGTGCCCAAC
TCGGTAGATG CGCTGGAGGA TGTTCTCGGC CAGGCTCGCG CCCAAGGCAT TACCGTCGTC
TCGCACGAGG CCACCGGAAT TCGGAACGCC GACATCGACA TCGAGGCCTT CGACAACGCC
GCCTTCGGCA GGCAGACCAT GCAGAGCCTC GCCCAGTGCA TGGAAGGGCA AGGCGAGTAC
GTCCAGTTCG TCGGTAGCGT GGCCATGACG ACACACATGC AGTGGGTGGA CGCCGCACAT
GACATGCAGC TGGCCGAGTT CCCCAGTATG ACCCGCATCG AGGGACCGGT CGAAACCGCC
AACGACGAGC CGACCGCCTA CGCGAGGGCC ACCGAGCTGC TGGTGAAGTA CCCGAACCTC
AAGGGCTTCC AGGGCGCGGC CAGTACCGAT GTGCCGGGAA TCGCCCGGGC CGTCCGGGAC
GCGGGCTTGC AGGACCGGAC ATGTGTGATG GGCACGGCGG TTCCTTCCGT GGCGTCGACG
TTCTTCGCCG ATGGCTCGAT CGACAAGATC TTCTTCTGGG ATCCGGCGAT GGCCGCGGAA
GCGCAGCTGC AGATCGCGCT GATGCTTGTG CAGGGCGAGA AGATCGAGAC AGGCACCGAC
CTGAATGTCC CCGGCTACGA CTCGCTGACC AAACTCGACG GCTACGACAA CGTCTTCGTC
GGAAATGCCG CGCTGGAAGC CGACGCCAAC ACCATCTCCC AGAACCAGTT CTGA
 
Protein sequence
MRRSRTALLG AVGVTMSLVA ASAGAANASP DAGDVTMVNV VKVEGIPWFN RMAVGVENFA 
SRTGVHASQV GADDTSAQKQ VQLIADLIPR RPTAITVVPN SVDALEDVLG QARAQGITVV
SHEATGIRNA DIDIEAFDNA AFGRQTMQSL AQCMEGQGEY VQFVGSVAMT THMQWVDAAH
DMQLAEFPSM TRIEGPVETA NDEPTAYARA TELLVKYPNL KGFQGAASTD VPGIARAVRD
AGLQDRTCVM GTAVPSVAST FFADGSIDKI FFWDPAMAAE AQLQIALMLV QGEKIETGTD
LNVPGYDSLT KLDGYDNVFV GNAALEADAN TISQNQF